Rhodamnia argentea (silver malletwood): 115743337
Help
Entry
115743337 CDS
T10595
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03440
Homologous recombination
rarg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115743337
03460 Fanconi anemia pathway
115743337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rarg03032
]
115743337
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115743337
Enzymes [BR:
rarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
115743337
DNA replication proteins [BR:
rarg03032
]
Eukaryotic type
DNA Topoisomerases
115743337
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115743337
FA (Fanconi anemia) pathway
115743337
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
115743337
NCBI-ProteinID:
XP_030533932
UniProt:
A0A8B8PHK5
LinkDB
All DBs
Position
1:complement(1520723..1532489)
Genome browser
AA seq
865 aa
AA seq
DB search
MAPPGVLMVAEKPSIALSIASALSRGQMSTRKGSTEVHEFDGVFLGFKACYKVTSVIGHV
FSVDFPTAYQDWKTTNPLDLFQAPTIKTEANPKAHIRRHLSHEALGCGYLVLWLDCDREG
ENICFEVIECTGFGRNKDRRKVYRARFSSISEKDIFKCMDNLVEPNKDEALAVDARQEID
LKVGVAFTRFQTAYFQGRYGNLDARVISYGPCQTPTLGFCVQRYLQLTTFKPEKFWTLHP
YIIHDGYEIKLEWERQKLFDLDVAMMLHKLVVGDAILEVTDISEKQESKSRPAGLNTVNL
LKVASSALGFGPQTTMQLAERLYTQGFISYPRTESTAYPASFDFRSTLAAQANNPTWGSY
VDKLLVDGYHKPRSGTDAGDHPPITPVNSATEDMLGNDVWRLYQYVCQHFLGSISSDCMY
TRTKVKFASQGELFHCIGHHITNKGFTSIMPWLAINEKSLPQFSKGEKLKSSKVELHEGN
TTAPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVQAGRKLVPTALGISLIRG
YQSIDADLCLPDIRSFIEQQITLVAKGQVDHCDVVAHVLQQFKQKFIYFTRQIGNMDVLF
EAQFSQLADSGRALSKCGKCLRYMKYISTQPPRLYCNTCEEVYHLPQNGTIKLYKELTCP
LDSFELLIFSMPGPEGKSFPLCPYCYNSPPFEGIDMLFGAGRMGNSNNPGKGAGMPCFLC
PHPTCRHSLITQGVCACPECNGTLVLDPISAPNWRLFCNMCNCLVLLPQGAHRVSTTTDR
CPDCDSMIIEVDFNKKATPLEDGATLHKGCILCDELLHSLVVVKHGKSFSRRGGRGRGRG
MGRSGRGTGRGSTKMVDPKMSFRGF
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcccggagtcctaatggtggcggagaagccgagcattgctctctccatagcc
tccgctctctcgcgcggtcaaatgtctacacggaaagggagcaccgaggttcatgagttt
gatggggtgtttctcgggttcaaggcgtgctataaagtgacttctgtcattggccatgtt
ttcagtgtagatttcccaacagcttatcaagactggaaaaccactaatcctttggatctc
tttcaagctccaacaattaagacagaggcaaacccaaaggctcatattcggaggcatcta
agtcatgaagctcttggttgtggatacttggtgttgtggttagattgtgaccgcgaagga
gagaacatatgctttgaagttattgagtgcactggctttggtcgaaacaaggaccgtaga
aaagtttatcgtgcacggttttcttctatctctgagaaggacatttttaaatgtatggac
aaccttgttgaacctaacaaggatgaagcattggctgtggatgctcgtcaagaaatagat
ctcaaagtgggtgtcgcatttacacgatttcaaactgcttatttccagggaagatatggg
aatcttgatgccagagtgatttcctatgggccttgtcaaactcctacccttgggttttgt
gtccaacggtatttgcaacttacaacgtttaagccagaaaagttttggacgttgcacccc
tacataatacatgatggctatgaaattaagctggaatgggaacgtcagaagctatttgac
ttagatgttgctatgatgctccataaactggttgtaggtgatgcaattttagaagttact
gacatatctgaaaaacaggaaagcaaaagtcgtcctgcaggtctcaacactgttaatctt
ctgaaggttgcttcaagtgcactgggctttggacctcaaacaacaatgcaattagctgag
agactgtacactcaaggattcatcagctatccacgcacagagagtacagcctaccctgct
tcctttgactttagaagtactcttgctgcacaagcaaataatcctacttggggtagttat
gtggacaagcttctagtagatggttatcataagccaaggtctggaacagatgctggtgat
caccctccaataactccagtaaactcagcaacagaggatatgcttggtaatgatgtgtgg
aggctgtaccagtacgtttgccagcactttctgggaagcatctcttctgactgcatgtac
actaggacaaaagtgaaatttgcaagtcaaggagaattattccattgtattggacatcat
atcacaaacaaagggtttacttctatcatgccatggttggccataaatgagaaaagtcta
cctcaattctctaaaggcgagaagttaaaatcttcaaaagtggagctgcatgaggggaat
acaactgctcctgattatcttagtgaaagtgagctgatttctttgatggagaagaatgga
atcggaaccgatgcatctatctctgtgcatatcaacaatatctgcgaacgcaactatgtg
caggtgcaggctggaaggaagttggttccaactgccttaggtattagcttaataagaggc
tatcaatcgattgatgctgatctctgtctacctgacatccgcagcttcatcgaacaacag
attactcttgttgcaaagggtcaagtggatcactgtgatgttgtggctcatgtgcttcag
cagttcaagcaaaaattcatatactttactaggcagattgggaacatggacgtattgttt
gaagctcaattttcgcaacttgctgattcaggtcgcgctctcagtaaatgtggcaaatgc
ctccgatacatgaagtacatttctactcagccaccacgtctgtattgtaatacatgtgag
gaggtttatcatcttcctcaaaatggaacaatcaagctgtacaaggagctcacatgtcct
ttggacagctttgaactcttgatcttctccatgcctggtcctgaaggaaaatctttccct
ctctgcccttattgctacaacagtccaccctttgaaggtatcgatatgcttttcggtgcc
ggcaggatgggtaactctaacaatcctgggaaaggagccggcatgccatgctttctctgc
ccccacccaacgtgtcggcattctctgataacccaaggagtatgtgcatgcccagaatgc
aatggtaccctcgtactagacccaatcagtgccccgaattggaggctcttctgcaacatg
tgcaactgcctcgttcttctcccgcaaggtgctcacagggtgtcgactacaaccgaccgg
tgtcccgactgtgactcaatgatcatagaagtggacttcaataagaaggcgacgccttta
gaggatggggccacgctgcataaaggttgcattctgtgtgatgagttgcttcattctctt
gtggtggtgaagcacggcaagtcgttttctagacgaggtgggagaggaaggggccgagga
atgggaagatctgggagaggtacaggccgcggcagtacgaaaatggtggatcctaagatg
tctttccgaggtttctaa
DBGET
integrated database retrieval system
