Rhodamnia argentea (silver malletwood): 115743363
Help
Entry
115743363 CDS
T10595
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115743363
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115743363
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115743363
NCBI-ProteinID:
XP_030533966
UniProt:
A0A8B8PGN5
LinkDB
All DBs
Position
1:2319649..2323690
Genome browser
AA seq
449 aa
AA seq
DB search
MVTPCRILCRLSTLVLVFLVVGAMSRSVNRDSSRSKNVETGALRSSSSNYSSMASSRSKE
ADHLNEQTVDDPEKVASMVDMIIRNSTERRNLGFFSCGTGNPIDDCWRCDPKWHLNRKRL
ADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPRPGTLRHAVIQDEPLWIMFQRDMVIQL
KQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHY
GWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDAVMGSTAITVSNNHFTHHNEVMLLG
HSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTIN
SQGNRYAAPGNPFAKEVTKRVDTAAGQWKSWNWRSEGDLLLNGAYFTPSGAGASGSYARA
SSLGAKPSSMVGSITSGAGPLPCRPGRSC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgccatgtcggatcttgtgtcgcctgagtacgttggttcttgtctttctggtt
gtcggagcaatgtccagatcggtgaaccgcgactcgtctcgatccaagaacgtcgagact
ggagcgcttcggagctcaagctcgaactactcatccatggcgtcttcacgctctaaagag
gccgatcacctgaacgagcaaacggttgatgacccggagaaggtcgcttccatggtcgac
atgatcatcaggaacagcacagaaaggaggaacttgggcttcttctcttgcggtactggc
aatccgatcgatgactgctggcgctgcgacccgaagtggcacctcaaccgcaagcgtctc
gccgactgtggcatcggtttcggcaggaatgccatcggcggccgcgatgggcgattctat
gtggtgactgaccccggcgacgacgacccggttaacccgaggcctggcacgctgaggcac
gctgttatccaggatgagcccctgtggatcatgttccagcgcgacatggtgatacagttg
aagcaggagctgatcatgaacagcttcaagaccatcgacgggcgcgggtctaacgtccac
atcgcgaacggggcgtgcatcacgatccagttcatcaccaatgtgatcatccacggcctt
cacatccacgactgcaagcccaccggcaatgccatggtcaggagctcgccgagccactac
ggttggcggaccatcgctgatggtgatgctgtatccattttcgggtcgagccacatctgg
gtcgaccacaactctctctccagctgcgcggatggccttgttgatgccgtgatgggctcg
actgcaatcactgtttccaacaaccatttcacccaccacaacgaggtgatgctgctcgga
catagcgattcctacacgagagacaagttgatgcaagtgactatcgcttacaaccatttc
ggcgaaggactgatccagagaatgccaaggtgtagacatggctactttcatgtggtgaac
aatgactacactcactgggaaatgtacgcaatcggcggaagcgccgaacccaccatcaac
agccagggcaaccgatatgccgccccgggcaaccccttcgcgaaggaggtgaccaagagg
gtggacactgctgcgggccagtggaagagctggaactggaggtcggagggagatctcctg
ctgaacggcgcctatttcactccgtcaggggccggggcatcgggcagctacgcccgagcc
tccagcctcggggccaagccttcttccatggtcgggtccataacctccggcgctggccct
ctcccctgccggcccggccgctcttgctag
DBGET
integrated database retrieval system
