Rhodamnia argentea (silver malletwood): 115743721
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Entry
115743721 CDS
T10595
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rarg04131
]
115743721
04121 Ubiquitin system [BR:
rarg04121
]
115743721
Enzymes [BR:
rarg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115743721
Membrane trafficking [BR:
rarg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115743721
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115743721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING-like
zf-RING_5
DUF1272
zf-C3H2C3
DUF7129
Rad50_zn_hook
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
115743721
NCBI-ProteinID:
XP_030534503
UniProt:
A0A8B8PK11
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All DBs
Position
5:2987283..2989282
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AA seq
374 aa
AA seq
DB search
MSSATSSYWCYRCSRFIRVWSQDSITCPNCDGGFVEEIENAPLPIPSDARRRRFPTAAMY
MIGSRSNQDQNPGLGLRRSRRNGGDRSPFNPVIVLRRPSDGGNDGGERSSYELYYDDGGG
SGLRPLPASISEFLLGSGFDRLLDQLSQIEINGIGRFEHPPASKAAIESMPTIEIGEDHV
STELHCAVCKELFELGSEAREMPCKHLYHTDCILPWLSMRNSCPVCRHELPADTPESQES
NSGENVRSEDEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNNGGVPR
RISWAARGSRGRESGGIRRILRNLFACFGGRSGSSVASSSESSLDSTVRARSISTSNMPS
LRRQRALANAASRR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcgacgtcgtcgtactggtgctataggtgcagccgtttcattagggtttgg
agccaagattcgatcacttgccccaattgcgacggcggattcgtcgaggagatcgagaac
gcgccgctgccgatccccagcgatgctcgccgcaggagattccccaccgccgcgatgtac
atgatcgggtcgaggtcgaaccaggatcaaaatcccggcctgggcctgcgcaggagccgc
aggaacgggggtgaccggtctccgttcaatccagtcatcgtgctgcgccggccgtccgat
ggcggcaatgatggtggcgagaggagcagctatgaattgtactacgatgatggtggaggg
tccgggttgaggcccttgcctgcgagcatatctgagtttttgctcggatccggctttgat
aggctgcttgaccagctctcgcagatcgaaatcaatggtattgggaggtttgagcatccg
ccagcatcaaaagcggcaattgagtctatgcccacaattgaaatcggtgaggaccacgtg
tcaactgaattgcactgtgctgtttgtaaggaattgtttgaattagggtctgaggctaga
gaaatgccctgcaagcacttatatcatactgattgcatattgccttggctgtcaatgcgc
aattcgtgccctgtgtgccgccacgagctgccggcagataccccagaatcccaggagtcg
aatagtggtgaaaatgttaggtcggaggatgaggagacagtaggtttgaccatatggagg
ttacctggtgggggattcgcggtgggacggttctctggtggaagaagaggtggcgagagg
gaattgccggttgtttacacggaaatggatggtgggtttaataatggaggagtgcctagg
agaatttcttgggctgcaagagggagtagaggtagagagagtggtgggatcaggaggatt
ttgaggaatctgtttgcttgttttggtggacggtcgggatcgtcagttgcttcaagttct
gagtccagtttggattcaactgtgagagctaggtcgatttcgacctctaatatgccctct
ttgaggaggcagagggctttagctaatgctgcaagcaggagatag
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integrated database retrieval system
