Rhodamnia argentea (silver malletwood): 115744120
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Entry
115744120 CDS
T10595
Name
(RefSeq) crossover junction endonuclease EME1B-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03440
Homologous recombination
rarg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115744120
03460 Fanconi anemia pathway
115744120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115744120
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115744120
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Hid1
Motif
Other DBs
NCBI-GeneID:
115744120
NCBI-ProteinID:
XP_030535080
UniProt:
A0A8B8PJU8
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Position
11:2236806..2252957
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AA seq
587 aa
AA seq
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MSDPILLSDEEDDRIVLCTPTPVHSRKRRIVHDARSEPTVLVVEDDPTPQKPASACASTP
TFVAETPMSGVAIVRCTAKTDSSGDQARAPEAPPKCSGISGLIFLESDNESDGFLGSELW
KANGASFASHAVKAFGHGINFVDSADSHGNDDLIQTSEGGACPAQLPCDVHTYQAHDCPD
KENFGMEQVDDEPKHLSGSKSYAQRKDSAQQMDWKSNCQSKAKQNAQKKDVANKAKNKKN
DEEKIRMKEEKKRKQEEAKLQQAIMKAEAAELKKLHKEKQKWEKGKFALKSIVAEIDAKV
VEMGSIGGHLLSGFTDKGLTFRIKANPIERSILWTMTVPEHLSQLCPKETVISYITIVYE
AEEFCNLVSSGSLFDHLNGIRCLYPSHTVCYLTNRLMAYINKREQQLYKNPASNGWQRPP
VEEALARLATHFARVHSRQCIDEPEVAQHIVGLTCSLASCQNRKKLTRLSVNANGSIIPK
GSLDGSLIKNNCWLKALMAIPKVQPRFAVAIWKKYPTMRSLLIVYMDPGKTVHEKEFYLK
DLTTEGLLGEDRRLGEVCSKRVYRILMAQSGSIRTDDVEDGADFFAT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacccgattcttctctccgacgaggaagacgaccgcatcgtgctctgcaccccc
acgccggtccactcccggaagcgccgcatcgtccacgacgcccgctcggagccgacggtc
ctggtcgtcgaggatgacccgacgccgcagaaaccggcctccgcctgcgcctccacgccc
accttcgtggccgagactcccatgtcgggcgtcgccatcgtgaggtgcactgcgaagacg
gattcctcgggcgaccaagctagggctccggaggctcctccgaaatgctccggtattagc
ggactgatttttttggaatctgataatgagtctgatggctttctcggaagtgagctatgg
aaggcaaatggggccagtttcgcttctcatgcagtaaaagcttttgggcatggcataaat
tttgtagattccgcagattctcatgggaatgatgatctaattcaaacatctgaaggtggt
gcgtgtccagcacaattgccatgtgatgtgcacacttaccaggcacatgattgtccagac
aaagaaaattttggcatggagcaggtggacgatgagccaaaacaccttagtggaagtaaa
tcatatgctcagaggaaagatagtgctcagcagatggattggaagtcaaattgtcaaagc
aaagcaaaacaaaatgctcagaagaaggacgttgcaaataaagcaaaaaacaagaagaat
gatgaggagaagattaggatgaaggaagagaagaaacggaagcaagaggaagcaaaattg
caacaagccatcatgaaggctgaagctgcagagttgaagaagttgcacaaagagaagcag
aaatgggagaaagggaaattcgcattaaagtccattgtagcggaaattgatgcaaaagtg
gttgaaatgggttcaattggaggtcatcttctttctgggtttactgataaaggacttacg
ttccgcataaaggcgaatccgattgaaagatcaatcttgtggaccatgacagttccagaa
catttatcacagctttgtcctaaagaaacagttatttcatacataacaattgtatacgag
gcagaagaattctgcaatctcgtttcaagtgggtccctttttgatcatttaaatggaatc
cgttgtctttatccgtctcatacggtttgctaccttacaaataggttgatggcatacatt
aacaaaagggagcagcaactgtacaagaatccagccagtaatggttggcaacgaccacca
gttgaggaggcgttagccagactggcaacgcattttgctagggtacactccaggcaatgc
atagatgaacctgaagtagctcagcacattgttggtctaacatgcagtctagcctcctgc
caaaacagaaagaagttaacaaggctttctgttaatgctaatggatccatcattcctaag
ggttctcttgacgggagcttaattaaaaataactgctggttgaaagcgttgatggctatt
ccaaaggttcagccacgatttgctgtggctatatggaagaaatacccgaccatgagatct
ctattgattgtctacatggacccaggcaaaactgtacatgaaaaggaattttacctgaag
gacttgacaacagaaggtttacttggtgaagacagaagattaggcgaggtgtgttctaaa
agagtgtacagaatactcatggctcaaagtggcagcataaggactgatgatgtggaggac
ggtgctgattttttcgcaacgtaa
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