KEGG   Rhodamnia argentea (silver malletwood): 115744122
Entry
115744122         CDS       T10595                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4 isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03020  RNA polymerase
rarg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115744122
  09124 Replication and repair
   03420 Nucleotide excision repair
    115744122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rarg03021]
    115744122
   03400 DNA repair and recombination proteins [BR:rarg03400]
    115744122
Transcription machinery [BR:rarg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     115744122
DNA repair and recombination proteins [BR:rarg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115744122
SSDB
Motif
Pfam: RNA_pol_Rpb4 L_PA-C-like
Other DBs
NCBI-GeneID: 115744122
NCBI-ProteinID: XP_030535082
UniProt: A0A8B8PL26
LinkDB
Position
11:2479981..2484906
AA seq 138 aa
MSGEEDENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSDDPLNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD
DEAIEKMLNDLSLIKRFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggggaagaggatgaaaatgctgctgagctcaaaattggtgatgaatttctgaag
gcaaagtgtttaatgaactgcgaagtatccttgatacttgaacataagtatgaacagctt
caacagatgtctgatgatccattgaatcaagtttctcaagtatttgagaagtcattgcaa
tacgttaaacgcttcagccgttataagaatcctgatgctgtcagacaagttagagaaatt
cttagcagatatcaattggctgaattcgagctttgtgttcttggcaacctttgccctgag
actgtagaggaagctattgctatggtaccatccattaagaaccgaggacgtgctctcgat
gatgaggcgattgagaagatgttgaacgacctgtcgctgataaagagattcgagtag

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