Rhodamnia argentea (silver malletwood): 115744262
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Entry
115744262 CDS
T10595
Name
(RefSeq) homeobox-leucine zipper protein HDG1 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rarg03000
]
115744262
Transcription factors [BR:
rarg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
115744262
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115744262
NCBI-ProteinID:
XP_030535232
UniProt:
A0A8B8PLI4
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Position
7:1185087..1190695
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AA seq
771 aa
AA seq
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MSLLYEVTLQRARMEGQSEIDRFGELFEGSFMGRLRDEGSGGSDNQFDGASGDDDQDDAV
DEEAEVLTRKRKKYHRHSPYQIQELEAFFKECPHPDEKQRLELSRRLGLESKQIKFWFQN
RRTQMKTQMERHENIMLRDDNNRLRNENDAMRSKLADPICSNCGGTAVFNGTGMVSYGEN
LLRVENARLKDEVARVRALTDKFLGKQLPTAFLPSSPPRSNRGSEFSPQRHVPNVSIAAS
AAVPMGMSSLDGMSNASPATPYARTAAAMARNQLSAEKSAYIDVAIASMNELIKMAEPNS
RLWLRTLDGAKEVLNHEEFSQLFTPRAGVRRGDLMTEASRETGIVPINSLAVVEILMDVN
RWAETFPCIIARSSTIEVISSGIRGNRNGALQVMHAEFQVLTPLVPLRQVRFLRFCKQHG
EGMWAVVDVSIGMIEDGSDPRGFANCRRLPSGCVLQDMPNGCSKVTWIEHSEYDETAVHP
LYHSFLSSGMGFSAQRWMASLQRHCECLLTFISSTSSNEDSSGMNASGRRNMLKLAQRMT
DNFCSGICASPLHDWEILHLGNMSGDVRVTTRKNAGRPGEPPGIVLSAATSIWMPIAHGT
VFNFVRNEQLRSEWDILSHGGPMQEIVHVAKGQRRDKCVSLLRANALSATDTSMVILQET
WTDASGSLIAYAPVDITLIESVISGGDPNSVALLPSGFALLPDSPSHIDGLKNPDGSLIG
TADSSGCLMTIGFQILVSSTPAAKLTAESVETVHNLLSRTIQRIKTALRLP
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgttatatgaggtcactttgcagagagccagaatggaggggcagagtgagatt
gaccgcttcggagaactcttcgagggaagcttcatggggaggctgagggacgaagggtcg
ggggggagtgacaaccagttcgacggagcttctggggatgacgatcaggatgatgctgtc
gatgaagaagcagaagttcttacccgcaagaggaagaagtaccaccgacacagcccatat
caaattcaagaacttgaagctttctttaaggagtgtcctcatcccgatgagaaacaaagg
ttggagctgagcaggaggcttggtttggagtccaagcaaatcaagttctggtttcagaac
cgaaggacccagatgaagactcaaatggagcgccatgagaatattatgctgagagacgat
aacaacaggctccggaacgagaacgacgcgatgcggagcaaactggccgatcccatttgc
agcaactgcggcggcacggccgtctttaatggtaccggcatggtgtcctacggggagaac
ctgctgagggtcgagaatgctcggttgaaggatgaagtagctcgggttcgtgctcttact
gacaagttcttggggaaacaacttcccactgcattccttccgtcgagccctcccaggtcc
aatcgtggttcggagttctccccccagaggcacgttcccaacgtttcaattgctgccagt
gccgcagtgccgatgggaatgagctctctagatggaatgtcgaatgcttccccggctact
ccttatgctagaacagcagctgcgatggctaggaatcaattgtcggctgaaaaatcggct
tatattgatgttgctatagcttccatgaatgaattgatcaagatggctgagcccaattcc
cgcctttggctgcggactttggacggagcaaaagaagtattgaaccacgaggagttctca
cagttgttcactcctcgtgccggtgtgaggcgtggtgatctcatgaccgaggcctcaagg
gagaccggtattgtccccatcaacagcttggctgttgtagagattttgatggatgtgaat
cgttgggcggaaacatttccctgcataattgctcgatcatccaccatcgaagtaatttca
agtggaataagaggaaacaggaatggagctctgcaagtgatgcatgctgaatttcaagtg
cttacaccgttggttcctttgcgccaagtgagattccttaggttctgcaagcagcatgga
gagggtatgtgggcggtggtcgatgtttccattggcatgatcgaagacggttcggatccg
cgtggtttcgccaactgtaggaggcttccttctggatgtgttttacaggatatgcccaat
ggctgttccaaggtaacttggatcgaacattcagaatatgacgaaactgcagttcaccct
ctttaccattccttccttagttccggcatgggattcagtgctcagaggtggatggcctcg
ctacagaggcactgcgagtgcttgctaacattcatttcatctacctcgtccaatgaagat
agttccggaatgaatgcgagtggaaggagaaatatgctgaaactggcacagcgtatgaca
gataatttctgttcgggaatctgtgcttcgccgctgcacgactgggaaatccttcacctt
gggaacatgagtggcgatgtgcgggtaacaactaggaaaaatgctggtagacctggcgag
cctcccgggatcgtactgagtgcagcaacttccatttggatgcccatagcgcacgggacg
gtattcaattttgtgcgcaacgagcagttgaggagcgagtgggatatattatcccatggt
ggcccaatgcaagagatagtccatgtggctaagggtcagaggcgcgacaaatgcgtctct
cttctccgtgctaatgccctcagtgcgaccgacacaagcatggtcattctgcaagagaca
tggacagatgcatcagggtccctcatagcctatgctccagtggacataacattgattgaa
tcggtgattagcggaggagacccgaacagcgtcgcgctcctaccatctggattcgcgttg
ctcccagacagtccgtcgcacattgatggactcaagaatcccgatggaagtctcatagga
actgctgacagcagcgggtgcctaatgacaatcggctttcagatcctcgtgagcagcact
cctgctgcgaagctcacggcagagtcggtcgagactgtgcacaacctcctctcccgcaca
attcagaggatcaaaaccgcattgcgattgccctag
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