Rhodamnia argentea (silver malletwood): 115744393
Help
Entry
115744393 CDS
T10595
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A isoform X1
KO
K07466
replication factor A1
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03030
DNA replication
rarg03420
Nucleotide excision repair
rarg03430
Mismatch repair
rarg03440
Homologous recombination
rarg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115744393
03420 Nucleotide excision repair
115744393
03430 Mismatch repair
115744393
03440 Homologous recombination
115744393
03460 Fanconi anemia pathway
115744393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rarg03000
]
115744393
03032 DNA replication proteins [BR:
rarg03032
]
115744393
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115744393
Transcription factors [BR:
rarg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115744393
DNA replication proteins [BR:
rarg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
115744393
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
115744393
MMR (mismatch excision repair)
115744393
DSBR (double strand breaks repair)
HR (homologous recombination)
115744393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
RADX
zf-CCHC_4
DUF223
CDC24_OB3
BRCA-2_OB1
zf-CCHC_2
Fer4_9
zf-CCHC_3
Fer4_10
Motif
Other DBs
NCBI-GeneID:
115744393
NCBI-ProteinID:
XP_030535399
UniProt:
A0A8B8PKZ4
LinkDB
All DBs
Position
9:7844941..7849058
Genome browser
AA seq
861 aa
AA seq
DB search
MPSAAKLTEGSIRKICERELVGESEVKPILQVTDMKVVNTRNHQNQDPSNDVERERQRFR
VVLSDGTHAQQGMLATQLNHLVDSGELQKGSIIRMNNFVCSSVRDRLIIIIVDLEVVLAK
HDLIGEHVQAKVPGSEVAKPTTPSLQNMRGGGSYLNSIDQGTCPATSAAPSYGNAPITPV
HSNTEPGVPRSAQFGGSYANQNMGIRNNTNEFRRSPVNSYVHQPQPSYQQPPPMYMNRGP
IAKNEAPPRIIPIAALNPYQNRWTVKARVTAKGELRHYNNPRGDGKVFSFDLLDSDGGEI
RVTCFNAVADQFYNQIETSKVYLISRGTLKPAQKNFNHLRNDHEIYLETTSIVQPCIEDD
NQIPRQQFHFHPISDVEGMESNSIIDVIGVVHSINPAASIMRKNGSETQKRSLHLKDESG
RSVELTLWGNFCNAEGQRLQILCDSGQFPVLAVKSGRVSDFNGKAVGTISTSQLFIEPDI
QEARRLKEWFEREGKTAPTVSISREITSMGRTEARKTISQIKDEKLGTSEKPDWITVSAN
IGYIKVDNFCYTACPIVIGDRQCNKKVTNNGDGKWRCDRCDRCVDECDYRYILQIQIQDH
TGQAWVTAFQESGEEIMGISAKELFYLRTEHDERFGEIIRKVFFTKFILKLKVKEEIFSD
EQRVKSTVVKADKVNFSSEARFYLDLLDKNRADGSVSSDVKSEHLVSNTGMISTLTGNAE
SMQSSSFMGNYSMGNNAGTGGSRSSADYTSAVQYGNQYNGARLSMTGPNDMNSSCTSCGR
SGHSSKNCPSIMSGPSQTMGGAYVNRPPGGSSDVCYKCNQTGHWARDCPGLSAVPPAYGS
SAATPRRYGMVSRERVGGVWE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggcggcgaagctcacggagggctcgatacggaagatctgcgagcgcgagctc
gtcggggagagcgaggtgaagccgatactgcaggtgacggacatgaaggtggtgaacacc
cggaaccatcagaaccaggatccgagcaacgatgtggagagggagaggcagaggttccgg
gtggtgctgtccgatgggacccacgcgcaacagggcatgctcgcgacgcagctcaaccac
ctggttgattcgggggagttgcagaagggctccatcatcaggatgaataacttcgtttgc
agttccgtcagggaccgactgattattatcattgttgacttggaggttgtacttgccaag
catgatcttattggagaacatgtacaggcaaaagttcctggaagtgaagtggcaaaacca
accacaccctctttacaaaacatgcgtggtggtggttcctacttgaatagtattgatcag
ggaacatgtcctgcaacaagcgctgctccttcttatggcaatgctcccattactcctgtg
cactcaaacacagaacctggtgtccctaggtcagctcagtttggtgggtcctatgctaat
caaaatatgggtatccgcaataataccaatgaatttcgacgttcacctgttaattcctac
gtccaccagcctcagccatcatatcagcagccgccaccaatgtacatgaatcggggacct
atagcaaagaatgaagctcccccaaggataattccaatcgctgctctcaacccttaccag
aacaggtggacagttaaggccagagtgactgcaaagggcgagcttaggcattacaacaat
ccacgcggtgatggaaaagtgttttcttttgatcttcttgattcggatggtggggaaatc
cgcgtgacgtgctttaatgctgtcgctgaccagttctacaaccagattgaaactagcaag
gtgtacctaatttccaggggtactttgaaacctgctcagaagaatttcaatcacctccga
aatgatcacgagatatatctggaaaccacctcaattgtacagccatgcattgaggatgat
aaccaaattccaaggcagcagtttcattttcatcccattagtgatgttgaaggcatggaa
agcaacagtattatcgacgtaattggtgttgtccactctataaatccggctgcatccata
atgaggaaaaatggttctgaaactcagaaaagaagccttcatttgaaagatgagtctggc
cgaagtgttgaattgactttgtgggggaacttttgtaatgcagaaggacaaaggctgcaa
attctgtgcgactctggacagtttcctgtactggcagtgaaatcgggtagagtcagtgat
tttaatgggaaggcagtgggtactatttctacgagccagttatttatagagcctgacatc
caagaggctcgcaggctcaaggagtggtttgagagggaaggtaaaactgcccctacggtg
tctatatcaagagaaataacaagcatgggcaggacagaggcaagaaaaactatatcgcag
atcaaagatgaaaagctagggacttctgagaagccggattggattacagtttctgccaat
attggatatataaaggtggataatttctgttacacagcctgtcccattgtaattggagat
cgccaatgcaacaagaaagttacaaacaacggcgatgggaagtggcggtgtgataggtgt
gaccgctgcgttgatgaatgcgactacaggtacattctccagatccagattcaggaccac
actgggcaagcatgggtgactgcatttcaggaatctggcgaggaaataatgggtatatcg
gcaaaggagttgttctatctgagaactgagcatgatgagaggtttggagaaatcatccgc
aaggttttcttcaccaaattcatattaaagttgaaagtgaaggaggagatctttagtgat
gaacaacgcgtgaagtcgaccgttgtcaaagcagacaaggtaaatttctcttcagaggcc
aggttttatctggatttgttggacaagaacagagcagatgggtctgtttcttctgatgtc
aagtcggaacacctagtttcgaataccgggatgatcagtactttaacagggaatgctgag
agtatgcaatcttcatcttttatggggaactattccatgggaaacaatgctggtacggga
ggttctaggtcatcggcagactatacttcagcggttcaatatggaaaccagtataacggt
gctagactttccatgacgggcccaaacgatatgaattcaagctgcactagctgcgggaga
agcggccatagctcaaaaaattgtccgagcatcatgagtggcccttctcagacgatggga
ggggcatacgtgaatagacctcctggaggttccagtgatgtatgctataagtgcaatcaa
actgggcactgggcgagagactgtcctgggctaagtgcagttccacctgcatatggaagc
agcgccgcaacacctaggaggtatgggatggtttccagggaaagggtcgggggggtttgg
gagtaa
DBGET
integrated database retrieval system
