Rhodamnia argentea (silver malletwood): 115744611
Help
Entry
115744611 CDS
T10595
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2 isoform X1
KO
K03255
protein TIF31
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rarg03012
]
115744611
Translation factors [BR:
rarg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115744611
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
CLU_N
TPR_2
TPR_9
PAM2
TPR_8
TPR_MalT
CLU
Motif
Other DBs
NCBI-GeneID:
115744611
NCBI-ProteinID:
XP_030535731
UniProt:
A0A8B8PLQ3
LinkDB
All DBs
Position
4:complement(19136953..19149265)
Genome browser
AA seq
1886 aa
AA seq
DB search
MAPKAGKAKPHKAKGEKKKKEEKVLPTVVEITVETPDDLQVTLKGISTDRILDVRKLLAV
HVETCHLTNFSLSHEVRGPRLKDSADILSLKPCHLTIGEEDYTEELAISHIRRLLDIVAC
TISFGSSSSSSSSPKTLARAVAKDSSSSKPNSPCDGAPFQSSGPDADERDAANCDPNLKS
GGEKKADSIQKCAGVVADKGDAASAVSLCPPPRLGQFYDFFSFSHLTPPVQYIRRSTRPF
LDDNTEDDFFQIDVRICSGKPMTVVASKKGFYPAGKRILISHTLVGLLQQNSRIFDAAYK
ALMKAFTEHNKFGNLPYGFRANTWVVPPVVADNPAVFPALPVEDENWGGNGGGHGRDGRH
DYRPWAKEFAILAAMPCKTSEERQIRDRKAFLLHSLFVDVSVFKAVAAIKHLIDANNCFT
SDLIVSMLHEERVGDLVIRVTKDAPDASLKLDCKNDGSRVLGMSQDELAQRNLLKGITAD
ESATVHDTSTLGVVVVRHCGYTAIVKVSAQVDWEGNPLPQDIDIEDHPEGGANALNVNSL
RMLLHKSSSPHSSSAVLRTQSSDSENLRSARSLIRKVLGESLLKLQGEPTKCTRSIRWEL
GACWVQHLQNQASGKNDAKRTEEAKLEPAVKGLGKQGGLLKEIKKKTDVRTSKSELGKEA
TICSNNDTDNKSNSINLKGPEKQDEEKEIMWKRLLPEAAYLRLKESETGLHFKSPDELIE
MAHKYYADTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMCSLGRVVELADKLPHVQS
LCIHEMVVRAYKHILQAVVAAVENVADVAASVASCLNILLGSPASENADTDTINDDTLKW
KWVESFLFKRFGWRWKQESCQDLRKFAILRGLCHKVGLELVPRDYDVESPSPFRILDIIS
LVPVYKHVACSSADGRTLLESSKTSLDKGKLEDAVTYGTKALSKLVSVCGPYHRMTAGAY
SLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALK
YVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHIALRYLHEALKCNQILLGADHI
QTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALE
QQEAARNGTPKPDASISSKGHLSVSDLLDFIAPDAGMKARDAQKKARAKVKKVDQNWDAS
GDYQTDETLSLNNPLAENSSDKENKADHTEATKEKEDPSLLGQLIVGMSSELVQDHSSDE
GWQEAIPKGRSPATRRSSSSRRPSLAKLNTNFANVSESSRYRVKSNIAAPSKVSTNESTT
SVVPSMPAMKKFVKSASFSPKVNSPNTSSSWTPSPKSAPARPAPGEQATKTSSLSCPISV
QAAGKLFSYKEVALAPPGSIVKAVAEQLPKETISGEQNSGETAAVELAINEATVSQDVDD
QELQKEAAENKCLDAETTKSASNEEQEKLEEGAPEEATVTTIPQIVENAVAVEVEGAAYL
QNQQGGSVLASEIEAVDSLKYSDTVGLRHDALRIVPDGPTASSEVDLSQVPVENASSLQE
KRACSTKEVVAEENENLDDCLNGDISDKPLAAELGKQDETDAGKEMTKRLSASAPPFNPS
TTPVFGSVPVQGLKDHGGILPPPLNVPPILSPVRRSPHQSATARVPYGPRLSGGYNRSGN
RVLRNKSGFHNGEHAGDGNHFSPPRIMNPHAAEFVPGQPWVPNGYPVSPNGYMVSSTNGI
PLSPNSFPLSPNGIPSLIYEYPPSPTGLPITAQNGCEASAVSSAESPIDMADEEVVETEV
PTVEQTSAEVVVEKHSVEETALENPLPCHGDTPHETEGKIKDDIPETVDSVKTKEMGNDI
AIDHEKPIKCWGDYSDGEVEMIEVSS
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaagcaggcaaagcgaaaccgcacaaggccaagggagagaagaagaagaag
gaagagaaagttttgcccaccgtggtggagattactgtggagacaccagatgacttgcaa
gtgacactcaagggtatatctacggacaggatcttggatgtgcgcaagctcttggcggtc
cacgtcgagacgtgtcacttgaccaatttctccctatctcacgaggttcgggggccaaga
ctcaaggactcggcggacattctttctcttaagccttgtcatcttaccatcggtgaagag
gactacaccgaagagctcgcgatctcgcacatacgtagactcctcgacatcgtcgcgtgc
accatttccttcggctcgtcctcttcttcttcttcatccccgaaaaccctagctcgagcc
gtcgccaaagactcctcctcctccaagcctaacagtccgtgcgacggcgcgccgtttcag
agctccggaccggacgccgatgagagagacgccgctaattgcgatccgaatctcaagtcg
ggaggcgagaagaaggccgattcgatccagaaatgtgccggcgtggtggccgacaaaggg
gacgcggcatcggcggtctctctctgcccaccgccacggctcgggcagttctatgatttc
ttctcgttctcgcatctcacgcctcctgtccaatacatccggagatcgacacgtccgttc
ctcgatgataatacagaagatgatttcttccagatagatgtgcggatttgcagtgggaag
ccaatgactgtcgtagcttcaaagaaagggttttatcctgctggaaaacgaattcttata
agtcatactttggttggcctgcttcaacagaatagcaggatttttgatgctgcatacaaa
gctctcatgaaagctttcacagaacacaataagtttggaaatcttccgtatgggttccga
gcaaacacatgggtcgttcctccagtcgtcgctgataatcctgcagtgttcccagcgctt
cctgtggaagatgaaaattggggaggaaatggtggtggtcatggacgagatggcagacat
gattacagaccgtgggcaaaagagtttgccattttggcggcaatgccctgtaaaacatca
gaggagaggcaaatccgtgatcgcaaagcatttttgcttcatagtctctttgtcgacgtt
tctgtttttaaagccgtcgctgcaatcaagcacctcattgatgcaaataattgcttcaca
tctgatctgatcgtttcaatgttgcatgaagaaagagttggggatttagttatcagggtg
actaaggatgcccctgatgcaagtttaaaactggactgtaaaaatgatgggagtcgggtc
cttggcatgtctcaagatgagctcgctcagagaaacttacttaagggcataactgctgat
gagagtgctacagtacatgatacttctactttaggtgtcgtggtcgttaggcattgcggc
tatacggcaattgttaaagtctcagctcaggtagattgggagggaaatccacttcctcag
gacattgacattgaagaccatcctgaagggggggcaaatgccttaaatgtgaatagcctg
cggatgctcctgcacaagtcatcctcacctcactcatccagtgctgttctacggacacaa
agttcagattctgaaaatttacgctctgctaggtcgctgataaggaaggtcttaggagaa
agtttgttgaagttgcagggagagcctactaaatgcaccagatctatcagatgggaatta
ggggcatgttgggttcaacatttacaaaatcaggcttctggaaaaaatgatgcaaaaaga
accgaagaagctaagcttgagccggcagttaaaggtcttgggaagcagggtggcctactt
aaggaaataaagaaaaagactgatgtcaggaccagcaagtccgaacttggaaaggaagct
actatttgcagcaacaatgacactgacaacaaatcaaacagcatcaatctgaagggacca
gagaaacaagatgaagaaaaagaaattatgtggaaaaggctgcttcctgaggcagcatat
ttgcgtcttaaagaatcggaaactggtctgcactttaagtcgccagacgagttgattgaa
atggcacacaaatattatgctgatactgcccttccaaagctggtggcagattttggttcc
ctcgagctttcaccagtcgatggaaggacattgaccgattttatgcacaccagaggattg
caaatgtgctcgttgggccgtgtggttgaacttgccgataagcttcctcatgtgcagtct
ctctgtatacatgagatggttgttcgagcatacaagcatatcctacaagctgttgtggca
gcagttgaaaatgttgctgacgtggctgcttcagtcgcttcatgtctaaacatactgcta
ggctcaccagcaagtgaaaatgccgacacagatactatcaatgatgatacgctaaaatgg
aagtgggtggaaagcttcctttttaaaaggtttggctggcgatggaaacaagagagctgc
caggatctcaggaagtttgctattcttcgtggattgtgccacaaagttggattagagctt
gttccaagggactatgatgtagagtcaccttcgccctttaggatattggatattataagc
ttggttcctgtttataagcatgttgcttgttcatctgcggatggacggacgctgctagaa
tcatccaagacttccttggacaaaggaaaactggaggatgctgttacttatggcactaag
gcactgtcgaagctggtgtctgtatgtggtccttatcatcgaatgacggcaggagcatat
agtcttctggctgtagtgctctaccatactggtgattttaatcaggcaaccatctatcaa
cagaaagcattggatattaatgagagagagctcggtctcgatcatcctgataccatgaag
agttacggggaccttgctgtgttctactatcggcttcaacacacagagttggctttgaag
tacgtgaatcgtgctttgtatctgttgcacttaacctgcggtccatctcatccaaatact
gctgccacctacatcaatgtagcaatgatggaagaaggtctgggaaatgttcacattgcc
cttaggtacctccatgaggctctaaagtgcaaccaaatacttcttggagctgatcatata
cagactgctgccagctatcatgccattgcaattgctctatctctaatggaggcctattcc
ttgagtgttcagcatgaacaaactaccttacagatactgcaggccaaacttggatcagag
gatctacgtacacaggatgcggctgcatggcttgagtattttgaatcgaaggctctagag
cagcaagaagctgctcgcaatggtacaccaaagccagatgcctcaatctccagcaaaggt
catctgagcgtgtcggatctccttgattttatagctccagatgcaggcatgaaagcgagg
gatgcccagaagaaggctcgtgctaaggtgaaaaaagttgaccagaactgggatgcatca
ggggattatcagacggatgaaaccttatcacttaataatcctcttgcagagaattcaagt
gataaggaaaacaaagctgaccatactgaggctacaaaagagaaggaagatccttcttta
ctaggtcaattgatagtgggcatgagtagtgaactggtacaagatcactcttccgatgaa
gggtggcaggaggccatccctaaaggccgctcacctgccactcgtaggtcttctagttcg
agaaggccaagcctggcaaaactgaacactaacttcgcaaatgtgtcagagtcttcgaga
tatcgcgtgaaatccaatattgctgcaccatccaaagtaagcactaacgaatcgaccacc
tcagttgtgccatccatgccagctatgaagaagtttgtgaaaagtgcaagcttcagtccg
aaggtcaatagtcctaacacctcatctagttggactcccagccccaagtctgcaccagct
aggccagctccaggtgaacaagctactaagacgtcttccttgtcttgtccaatcagtgtt
caggctgctgggaagcttttctcctataaggaagttgctctggctccacctggatccata
gtgaaggcagttgcagagcagttgcccaaagaaactatttcaggtgagcagaattctgga
gagacagctgcagtggagttggctataaacgaggcaactgtatctcaagatgtagatgat
caggaacttcagaaagaagcagcagagaataagtgtctagatgccgagacgacaaaaagt
gcttcaaatgaagagcaagaaaaattagaggaaggagccccggaggaagccacagttacc
accattccacaaatagttgaaaatgctgtggcagtggaggttgaaggcgctgcttatcta
caaaatcaacaaggtggcagtgttctggcttcagaaatcgaggcagttgatagcttaaaa
tattcagacacggttggtttaagacatgatgcgttgcgaatagtacctgatggtccaact
gcttcctctgaagtagatctttcacaagttcctgttgaaaatgcatcttcattgcaagag
aaaagagcatgctctaccaaagaagtggtggctgaggaaaacgaaaacctagatgattgt
ctgaatggtgatataagtgataagcccttggcggctgaattaggaaagcaagatgaaact
gatgctggaaaggagatgactaagagactctctgcatctgcgccaccctttaatccttcc
accactccagtttttggctctgttcctgttcaggggctcaaagatcatggaggaatcttg
cctccaccgttgaatgttcctccaatactcagtcctgtccgcaggtcacctcatcagtct
gcaacagcaagggtcccgtatggtcctaggctatctggtggctataataggtctggaaat
cgggtcctccgtaacaaatctggcttccataatggtgaacatgctggagatgggaaccac
tttagccctccaagaataatgaacccacatgcagctgagtttgtgcctggccaaccctgg
gttcccaacggctatccagtatcccctaatgggtatatggtttcttcaacaaatggtatc
ccactgtctcctaacagttttcctctgtcaccaaatggtattccctcgcttatatatgaa
tacccaccatcacccactggtcttcccatcactgctcaaaatggctgcgaagcatctgca
gttagttcagcggaatcaccaatagatatggctgatgaggaggttgttgaaactgaagtt
cctacagtggagcagacttctgcagaagtagtagttgagaagcactccgtcgaagaaaca
gcgctagaaaatcccttgccatgccatggggacactcctcatgagactgaaggaaagatc
aaagatgatatcccagagactgtggattctgtgaagaccaaagagatgggcaatgacata
gcaatcgatcacgagaaacccatcaaatgttggggggactacagtgacggcgaagtggag
atgattgaggtttcaagttaa
DBGET
integrated database retrieval system
