Rhodamnia argentea (silver malletwood): 115744673
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Entry
115744673 CDS
T10595
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
KO
K12897
transformer-2 protein
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115744673
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rarg01009
]
115744673
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rarg03041
]
115744673
Protein phosphatases and associated proteins [BR:
rarg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115744673
Spliceosome [BR:
rarg03041
]
Common components
Common spliceosomal components
SR proteins
115744673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
CoV_nucleocap
RRM_5
Motif
Other DBs
NCBI-GeneID:
115744673
NCBI-ProteinID:
XP_030535839
UniProt:
A0A8B8PM76
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All DBs
Position
8:complement(4260041..4263018)
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AA seq
221 aa
AA seq
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MADSPRKKYSRSPSPWREQSRSRSRSRSPSWSKHRPRSQSRSRGRSRSRSHGRDDNNPGN
ALYVTGLSTRVTERELEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDTVEDANRCVKY
LNQSVLEGRYITVEKSRRKRPRTPTPGQYLGLKSTRDHGYRGDRGDRGGRYRGREDYGYR
RSPRRSPYRGGRDYSPRRSPYSGRSRRDRSRSPIYSPRGSR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctcctcgcaagaagtattcaagatccccgtcaccttggagagagcagtca
aggtctaggtccaggtctaggtccccgtcctggtccaagcaccggccgaggtcacagtcc
agaagccgtggaagatcaagatccagaagtcatggcagggatgataataatcctgggaat
gcactttatgtgaccggtttatccactagggtcactgaaagggaactagaagaccacttt
tcgaaagaggggaaggtcgcttcttgcttcctcgtggtggagcctcgcacacgcatctct
cgcggttttgcatttgtgaccatggacactgttgaggatgctaatcgttgcgtcaagtat
ctgaatcagtctgtcttagaagggaggtacatcactgttgagaagtcacggaggaagcga
ccacggactccaactcctgggcaatatcttggattgaagagcactcgggaccacggctat
cgtggtgatcgtggtgaccgtggtggtaggtatcgtggccgggaggattatggctaccgt
agatccccaaggcgctcaccatatcgaggtggtcgtgattattctcccaggcgctcacct
tacagtggaaggtcaaggagggacagatcaaggtcacctatctattctcctcgtggttct
aggtga
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