Rhodamnia argentea (silver malletwood): 115745267
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Entry
115745267 CDS
T10595
Name
(RefSeq) DNA mismatch repair protein MSH3
KO
K08736
DNA mismatch repair protein MSH3
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03430
Mismatch repair
Brite
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115745267
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NCBI-GeneID:
115745267
NCBI-ProteinID:
XP_030536580
UniProt:
A0A8B8PP73
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Position
7:complement(1264838..1272354)
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AA seq
1076 aa
AA seq
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MGKQKQQVLSRFFAPKPKTPLLTPDPSTSSPSPSTPPPKIAAVVSFSPSKRLLSSRLASP
LKKPKLSPHTQNPVPSLLQKPHKKETPESSSKKYTPLEQQVVELKDRYPDVLLMVEVGYK
YRFFGDDAEVAARVLGIYAHMDHSFMTASIPTFRLNVHVRRLVNAGYKVGVVKQTETAAI
KAHGSNRVGPFCRGLSALYTKATLEAAEDMGGKDEGFGRESSYLACVVEENLLVKNRECS
MQSGFDVKIGVVAIEISTGEVVFGEFNDNSMRSGLEAMILSLSPAELLLGDPLSNQTMKL
LLSYAGPASNVRVEHAPQDSFTKGGALAEVMTVYESMNSVDTSVNEMRSREDNENRSSAV
EVMMNMPDLAVKALALSMRHLKQYGFERILCLGAAFRPYTCDMEMSLSGNVIQHLEILRN
NSDGSEAGSLMEIMNNTLTIYGSRLLRHWVTHPLCDRSMISARLDAVAELAESMGSYKVT
GDTTVLDNEDWDVEVRHAELNHLLSSVLTHLGRSPDLQRGITRIFYCTATASEFIAVMQA
ILHSGKQLQRLHMEEEFNNDVLDLKSVRSVLLRKLILTASSSSMISNAAKLLSVLNKEAA
EKGDLSNLIVISDGQFPEVTAARKSVRVAKERLESLIVMYQKQLRMRNLEFMSVSGTTHL
IELPVEVKVPLNWVKVNSTKKTIRYHPPEVVTALDQLTLANEELIIACRTAWDGFLQGFG
KYYPEFLASVQALAALDCLHSLALLSRNKNYVRPIFVYDDHPVQIEICSGRHPVLETLLL
DNFVPNDTDLHGDGEFCQIITGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLHVLDG
IYTRMGASDSIQKGRSTFLEELSEASLILRYCTPRSLVIIDELGRGTSTHDGAAIAYATL
HHLLEKKRCMTLFVTHYPKIANIQNEFPGSVAAYHVSYLTSSKDARSDSSSDHEDVTYLY
KLKSGISERSFGFKVAQLAQIPPSCINRATEMASKLEAVMSNRSENGLMQTMAEQEAERE
KKLRPCFLQNLEYWDTFYKEFLSNLSSALEEEDAAKRFQFLIRARTLAKQFDTGSS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcaaaagcaacaggtactatcgcgcttcttcgcacccaaacccaaaacgcca
ctgcttacgccggacccttcaacgtcttccccatccccatcgaccccacctcccaaaatc
gccgccgtcgtctccttctctccctccaagcgcctcctctcttcccggctcgcctccccg
ctcaagaaaccgaaactctcacctcacactcaaaaccctgtgccctctctcctccaaaaa
cctcataagaaagaaacaccggagtcgagctccaaaaaatacacgccacttgaacagcaa
gtggtggagctgaaagataggtacccggatgttcttttgatggtagaagtgggttacaag
tacaggttctttggggatgacgcggaagtagctgctagagttctggggatttatgctcac
atggatcatagctttatgactgccagcataccaacttttcggcttaatgtccacgtgagg
aggcttgtgaatgctgggtacaaggtcggtgtggttaagcagaccgagaccgcggctatt
aaggcccatggttcgaatcgcgtaggcccgttctgtcgcgggttatcagccttgtatacg
aaggccacgctcgaggcggcggaggatatggggggtaaggacgaggggtttggtagggag
agtagttatctggcttgtgttgtggaggagaatttgttggtgaagaatagggaatgcagc
atgcagagcgggtttgatgtgaaaattggagttgttgctattgagatctcaacaggggaa
gttgtttttggtgagttcaatgataattcgatgagaagcgggcttgaggcaatgatttta
agtttgtcaccggctgagttgcttcttggagacccactttcgaatcaaacgatgaagtta
ttactctcttatgctgggcctgcctccaatgttcgtgtggagcatgctcctcaagatagc
tttacaaagggaggtgcactagctgaagtcatgactgtttatgagagtatgaatagcgtc
gacacatcagttaatgaaatgcgaagcagagaagacaacgagaataggagctcagcagta
gaggtaatgatgaatatgccagatttggctgtcaaagcattggccttatcgatgcgtcat
ctaaagcaatatggttttgaaaggattctgtgtcttggagcagcttttcggccctataca
tgcgatatggagatgagcctttctggcaatgtgattcaacatcttgagatcctgaggaat
aactctgatggctctgaggctggctcgttgatggagatcatgaataacactctcaccatc
tatggttcgaggcttctaaggcactgggtgactcatcctttgtgtgatagaagcatgatt
tctgctcgccttgatgctgttgctgagcttgcagaatcaatggggtcttacaaagtaaca
ggagatactactgtgctcgataatgaggactgggatgtggaagtaagacatgcggagctc
aatcatttgctttcctcagttttgacacatttgggaagatcaccagatcttcaacgtgga
ataactagaatcttctattgcactgccaccgcatcagagtttattgcagtcatgcaagct
atactgcattcaggaaaacaacttcagcgacttcacatggaggaagagttcaataacgat
gtcctggatttgaagtctgtccgttctgttttgttgagaaagttgattttgactgcatca
tcatctagcatgatttccaatgctgcaaaactactttcagttctaaacaaagaagctgct
gaaaagggggacttgtccaacttaattgtgatatccgatggccaatttcctgaggttact
gctgcccgaaaatctgttcgagtggcaaaggagagattggagtcattgattgttatgtac
cagaagcaacttcgaatgcgaaatttagagttcatgagtgtctctggaactacacatctg
atagagctccctgtagaagtaaaggttcctttgaattgggtcaaagtaaacagcactaag
aaaacaatacgctatcatccacccgaagtcgtgactgctttagatcaattgacattggca
aatgaagagttgataattgcttgccgaactgcttgggatggttttctgcaaggatttggc
aaatactaccctgagtttctagcttctgttcaagctttggctgctttggattgcctacat
tcactagctctcctttctagaaataagaattatgttcgtccaatttttgtctacgacgat
catcccgtccagatagagatatgttcgggtcgtcatccagttttggaaactttgttactt
gacaattttgttccaaatgataccgacttgcatggggatggagaattttgtcagattata
acaggaccgaatatgggaggcaagagttgctatatccgccaagttgccctcattgctatt
atggctcaggttggttcctttgtaccagcatcttcagcgaaattacatgtacttgatggc
atttacaccagaatgggcgcatctgatagtattcagaaagggaggagcaccttcctcgaa
gaattgagcgaggcttctcttatactccgttactgcactccacgttcactagtaataatt
gatgagttgggcagaggaactagtacacatgatggtgctgctattgcttatgccacattg
catcatcttctagagaagaaaaggtgcatgaccctctttgtcacgcactacccgaaaata
gccaacatccaaaatgaattcccggggtctgttgcagcatatcatgtttcatatctgaca
tcaagcaaagatgcaagatcggactcaagttctgatcatgaggatgttacctacttgtac
aaacttaagagtggtatttcagaaagaagcttcggattcaaggttgctcagcttgcacag
ataccaccttcttgtataaatcgagccacggaaatggcttcaaagcttgaggctgtcatg
agtaataggtcagagaatgggttgatgcagacaatggctgaacaagaagcagaaagagaa
aagaagttgaggccctgctttctccaaaatctggagtattgggatactttttataaggaa
ttcctttcaaacctgagttctgctttggaagaggaggacgcggcaaaacgatttcagttc
ttaattcgtgctagaactctggcaaagcagtttgacactggatcctcataa
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