Rhodamnia argentea (silver malletwood): 115745278
Help
Entry
115745278 CDS
T10595
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Module
rarg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115745278
Enzymes [BR:
rarg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115745278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
pAdhesive_6
Motif
Other DBs
NCBI-GeneID:
115745278
NCBI-ProteinID:
XP_030536599
UniProt:
A0A8B8PPB9
LinkDB
All DBs
Position
1:125659..127767
Genome browser
AA seq
403 aa
AA seq
DB search
MAGLFFNACPNYRAVVVLALSIFMLLSGSPSPATADSAQYDVVSLGAKADGKTDSSKAFL
SAWASACGSTSAATMYVPQGRFLVRSASFDGPCKNSAITVRIDGTLVAPSDYNVNGDSGY
WIVLRHVTGVSVIGGTLDGQGTGLWACKLSGKSCPSGATSLEISNSQNILVSELSSLNSQ
MFHMVINGCQNVKMQGVMVSASGTSPNTDGIHISASTGVTILNSKIGTGDDCVSIGPGSN
NLWIENVACGPGHGISIGSLGKDQQEDGVQNVTVKTVTFTGTQNGVRIKSWARPSNGFAR
NILFQHAIMNNVQNPIIIDQNYCPDSGCSTKDSGVRVSDVTYQDIHGTSATEVAVKFDCS
SKYPCTGITMQDVKLTYGDQVATASCANAGGTASGTEQPSSCL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggccggactcttcttcaacgcttgtccgaattatcgtgcggtggtggtacttgccctc
agcatcttcatgttgttgtccggctcaccatcacctgcaactgcagattccgctcagtac
gacgtggtctctctcggcgccaaagccgatggcaagaccgactccagcaaggccttcctg
agcgcatgggcgtcggcgtgcgggtccacgagcgctgccaccatgtacgtcccacagggc
cggttcttggtgcggtctgcctccttcgacgggccatgcaagaactcggccatcacggtg
cgcattgacggcacgctcgtcgcgccttccgactacaacgtgaacggggattcggggtac
tggatcgtgctcaggcacgtgacaggggtctccgtgattggagggaccctcgacgggcaa
ggcacaggcctctgggcttgcaagctctccggcaagagctgccctagcggcgctacgagc
ttggaaattagcaactctcaaaacatattagtcagcgaactcagctcactcaatagccag
atgttccatatggtcatcaacggttgtcagaatgtgaagatgcaaggcgtgatggtgtcg
gcctccgggaccagccccaacaccgacggcattcacatcagtgcctccaccggtgtcacc
atcctcaactccaagattgggacaggcgatgattgtgtctccattggccccggtagcaac
aatctctggatcgaaaacgtcgcttgtggacccggacatggcatcagcattgggagtctg
ggcaaggatcaacaagaggacggtgtccaaaacgtgacggtcaagacggtcacattcacc
ggcacgcaaaatggagtgaggatcaagtcgtgggccagaccgagcaacggctttgccagg
aacattctcttccagcacgccatcatgaacaatgtccaaaacccgatcatcatagatcag
aattactgtcccgactccggttgttctactaaggattcgggtgttagagtgagcgatgtg
acatatcaagatatccacgggacatcggcgaccgaggtggccgtgaagttcgactgcagc
tcgaagtacccgtgcaccggaataacgatgcaagacgtgaagctgacttacggtgaccaa
gtggccacagcatcttgtgccaatgctgggggcacagcttctggcacggaacagccctcc
agttgcttgtag
DBGET
integrated database retrieval system
