Rhodamnia argentea (silver malletwood): 115745340
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Entry
115745340 CDS
T10595
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04120
Ubiquitin mediated proteolysis
rarg04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115745340
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
115745340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115745340
Enzymes [BR:
rarg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115745340
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115745340
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115745340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_like
Beta-prop_DCAF4
EIF3I
ANAPC4_WD40
Beta-prop_EIPR1
PQQ_2
Beta-prop_WDR75_1st
Med7
Motif
Other DBs
NCBI-GeneID:
115745340
NCBI-ProteinID:
XP_030536702
UniProt:
A0A8B8PQV7
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Position
7:1280582..1282250
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AA seq
410 aa
AA seq
DB search
MNNFLPPQKSQQFTTRNEEAAAAAAQDEEEEDRRKENQENIESRGGQDRTLDVAPRPEPP
REEEGRARCEWDFHLHTVISSSDAASSSASDTLGVIEFDPPGALIATGGIARKIRIYGLS
SLVPQEIDPPTIAFLEHSSACSYYICTPAKLSSLRWRPGSGSRVIGSGDYDGVVTEYDLE
RQVPVFERDEHGGRRIWSVDYSSWGMAVGASGSDDGTMQLWDPRCGDGGRCLSMVRPGEA
GRSTAVCSVEFSPFDSATVAVGCADWRAYTYDLRNMSGPVRVFDGHAKTVTYTKFLSAHA
MVSASIDGCLKQWSVADACAVRTYRGHVNTRSFVGLSVCRDGGLIACGSESDQVFVYDAR
WGEPIWAHRFEGGFVSSVCWRQAGSDRCTLVAGGSDGALQLFVGMKKSSS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttcttaccgccccagaaatcacagcaattcacaacaagaaacgaagaagca
gcggcagcagcagcccaggacgaagaagaagaagatcggaggaaggagaatcaagaaaac
attgaaagtagaggaggtcaagatcgaacgctcgacgtcgccccccggcctgagccaccc
cgagaagaagaaggaagagcgagatgtgagtgggacttccatctccacaccgtcatttcc
tcctccgacgccgcctcctcctccgcctccgacaccctcggcgtcatcgaattcgacccc
cctggcgcactcattgccaccggcgggatcgcgaggaagatcaggatttacggcttgagc
tctttggtgccccaagaaattgacccgccaacaattgcatttttggagcattctagcgcc
tgcagctactacatatgcactccggctaagctgagcagcctcaggtggcggcctggctca
ggcagccgggtcatcggatccggcgattatgatggggttgtcacggagtacgaccttgag
cggcaggtgccggtgttcgagcgtgacgagcacggcggccgacggatctggagtgtggac
tactcgagctggggtatggccgtcggggcgtctgggtccgatgatgggacaatgcagctc
tgggacccacgctgcggcgacggcgggaggtgcctttccatggtgcggcccggggaagcg
ggtcggagcaccgccgtatgcagcgttgagttcagcccgttcgacagcgccactgtggcc
gtagggtgcgcagactggagagcctacacctatgacctgcgcaacatgtcgggcccagtc
cgggtcttcgatgggcatgcgaagacggtgacctacaccaagttcctcagcgcccatgcg
atggtgtccgcgagcatcgacggctgcctgaagcaatggagcgtggcagacgcatgcgcg
gtccgcacgtatcgggggcacgtgaacacacggagctttgtcggtctgtctgtgtgccga
gacggcgggttgattgcctgtggctcggagagcgaccaggtattcgtgtatgacgcaagg
tggggcgagcccatctgggcccaccggttcgagggcgggttcgtgagcagcgtgtgctgg
aggcaggccggctcggacaggtgcacgcttgtcgccggcgggtcggacggtgctttgcag
ctctttgtgggcatgaagaagtcatcgtcatga
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