Rhodamnia argentea (silver malletwood): 115745849
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Entry
115745849 CDS
T10595
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03440
Homologous recombination
rarg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115745849
03460 Fanconi anemia pathway
115745849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115745849
03036 Chromosome and associated proteins [BR:
rarg03036
]
115745849
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115745849
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115745849
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
115745849
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
115745849
FA (Fanconi anemia) pathway
Downstream FA components
115745849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
115745849
NCBI-ProteinID:
XP_030537319
UniProt:
A0A8B8PRB2
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All DBs
Position
7:19385636..19393919
Genome browser
AA seq
1125 aa
AA seq
DB search
MSAWQILSDCGGDYRWELLGGHLGTALESEPSGSPTEQRLSNSPLPSMSDLLLQGCSKLL
ENGNAASQSLPMFRTGSGKSVALKQSSIAKALSVLGDEDGDDFPDPGQAHVRDFRPDRSS
FIFQTGSGKVVSVSPTGMERAKPLLGLEEGTDQCDFTGLRPTRWPPIVNTTSRCQLASHL
DRKEGSARADALNSISAPSISFNRGTSLVETKLKDSGNCSDMQPKVYDIPSKPAPIKFQT
AGGRSISISGDALKRARSLLGDPELGDFLNEGNFDSRPCSVLNERQTGDNSSNKENDYPM
SSLCQGTPKRNHMSNGFITPLRSSSNKVRFSKELDKLCFADNLINKFDAAAHDCTDRSNF
DVACLQKPLTTRSHSSSPVIGKSLANGIGPRMNPHVRLSGGSLMDISNRVDITCSGAGKV
EMRRLKKASFVSPFKRPRTSEFSSPLKRDHIFSSSGLSTSLAKQSLHKGKVSSRYASQIP
RVYVSEYFAGPPREHNMVQHIPDQLRRIKPDNAHKFVFANESGLNCIGAEAFLHLLVQSG
ASTQHISKAWVTNHYRWIIWKLASYERYYPATTGKFLTITNVLEELKYRYDREINHGHRS
AIKRILEGDASPAALLVLCVSAIHVDDNLKIRSSTTPLNGTLNNVMRVELTDGWYSVDAL
LDDLLSKHLMEKKMYIGQKIRIWGARLCGWAAPVSPLEETRTVTLSLHANGTYRAHWADR
LGLCKGAGAPLAFRCIKSNGGPIPMTLVGITRIYPILYRERLSSGDSIVRSERMEMKIRQ
LYNQRRSLVIDGAVSEFQRSTKDFHLSNDSDSEEGAKISKLLEMSAEPEVLMAEMSPEQL
NSFAAYRSKLEVTRQSDMEKSIEKALQDASLTEREVTAFIRVRVVGLKRKNYHGKSSHEE
GFITIWNPTEKQQYDLIEGQAYAISELVPVKSNSDTIYLQARGPTTKWRRLSSREVENFE
PFFSPRKAISLSNLGEIPLSSEFDIAAFVLYVGEVYTTSHQKRQWIFVTDGSKVELQTGK
YDTSLLAISFSFPPVDDSSFVPINYNLVGSTVGFCNLIKRAKDQMNHLWVAEATENSNYF
LSFDPPCFCHLKEAALSTHGWAKLSELVIDELKERVLFMIGDCKS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtggcaaatactctccgactgtggcggtgattaccggtgggaactgctcggc
ggccatctggggactgcgctcgagagcgaaccaagtggatctccgactgaacagcgtcta
tccaattcacctctcccttcaatgtccgatcttttgcttcaaggatgttcgaagcttcta
gagaatggcaatgctgcttctcagagcttgccgatgttccggactgggtcgggcaaatca
gtggctctgaaacagtcttctatagccaaagctttgtctgttctgggcgatgaagatggt
gatgatttccctgatcctggacaagcgcatgttcgagattttaggcctgatagatctagt
tttattttccagactgggtctgggaaagtggttagtgtatctcctacaggaatggaaaga
gccaagccgttgctagggctggaagaaggtactgatcaatgcgatttcacaggcttacga
cccacaagatggccacccattgtcaataccactagtaggtgtcaacttgcatcacatttg
gacagaaaagaaggttcggctcgtgctgatgcccttaactctatatctgctccgagcatc
tcatttaatcgtggaactagtttagtagaaactaaattgaaggactctggaaattgtagt
gatatgcaaccaaaggtttatgatataccttctaaaccagctccaatcaagttccaaaca
gctggcgggagatctatatcaatttctggtgatgcccttaaacgcgccaggagtcttctt
ggtgatccagaactgggagacttcttgaatgaggggaactttgacagcagaccatgttct
gtcttgaatgagagacagactggcgataattcatcaaacaaagaaaatgattatccgatg
tcctctctctgtcaaggaacaccaaagaggaaccatatgtccaatggtttcataactcct
ttgcgttcatcctctaataaagtgcgtttctcaaaagagttggacaaactatgttttgcg
gataatttgatcaacaagtttgatgcagctgcccatgactgtacagataggtccaatttt
gatgtggcttgtctgcagaagcccttaactactaggtcacattcctctagccctgtgatc
ggcaagtccttggcaaacggaataggtccaaggatgaatccacatgtaagattgtcaggt
gggtcactgatggacatttcaaacagagttgacatcacttgttcaggcgctggaaaagtt
gaaatgagaaggctcaaaaaagcaagtttcgtttcccctttcaaaaggccccgaacttct
gaattctcgtcccccttgaaaagggatcacatattttcttccagtggcttatccacttca
ttggctaagcaatccctccataaaggaaaggtgtcatctcgatatgcatctcagattcca
agagtatatgtgagtgaatactttgcggggcctcctcgagagcataacatggtgcagcat
attccagaccagttgagaaggatcaaaccggataatgcccacaaatttgtgtttgctaat
gaatctggcttgaactgcattggggcagaagccttcctccacttgctggtccagtctgga
gcatctacacagcatatttctaaagcatgggtcacaaatcactataggtggattatttgg
aagcttgcctcttatgagagatattacccagctacaactggaaagtttcttaccatcaca
aatgtgctagaggaactgaagtatagatatgatagggaaatcaatcatggccaccgttct
gcaattaagagaattcttgaaggagatgcctcccctgccgcattgcttgtgctgtgtgtt
tcagctatccacgtcgatgacaaccttaagattcgaagctcaaccacaccactaaatggg
acactaaacaacgtcatgcgagtggagctaactgatggctggtactctgtagatgcgctt
cttgatgatttgctgtcaaagcatcttatggaaaagaaaatgtacattggccaaaaaatt
cgaatctggggagcaagattatgcggctgggctgcacctgtttcaccgcttgaggaaaca
agaacagttactttatcattgcatgcaaatggaacatatagagctcattgggctgatcga
ctgggactttgcaagggtgctggagctccattggcattcagatgtatcaagagtaatgga
ggtccaatccctatgactttagttggaattacacgaatataccctattctctacagggag
aggttaagtagtggagattccattgtcagatcagagaggatggagatgaaaatcaggcag
ctgtataatcagaggcgttccttggtcattgatggcgccgtttccgaatttcaacggagt
accaaagactttcatctttctaatgatagcgatagtgaggagggagcaaaaatatcaaag
ttacttgagatgtctgctgaaccagaagttctaatggctgagatgagtcctgaacagttg
aattctttcgctgcttatcgatcgaaattggaagtgactaggcaatctgacatggagaaa
tctattgagaaagctctgcaagatgccagtttgactgagagagaagtcactgcatttata
agggtgagggtggtaggactaaaaagaaaaaattaccatggaaaaagtagtcatgaagag
ggatttataacaatctggaacccaactgagaagcagcaatatgatttgattgaggggcag
gcatatgctatctctgagcttgttccagtgaagtccaattcagataccatttacctacag
gcaagaggacccactacaaaatggcggcgtttatcttctcgagaagtcgaaaatttcgag
ccattcttcagtccccgcaaagccatttctctatcgaatttgggtgaaattcctctttcc
agtgaatttgatattgctgctttcgttctatacgtgggtgaggtttacacaacgtcccac
caaaaaaggcagtggatctttgtgacagatggttctaaagttgagctgcagactggcaaa
tatgacacttctttacttgccatcagcttctccttccctccagttgacgatagttcattt
gtcccgatcaattacaaccttgtaggatcaacggttgggttctgtaatcttattaaaaga
gcaaaagaccaaatgaatcatctttgggtagcagaagcaacagaaaattcaaactacttt
cttagcttcgaccctccctgcttttgtcaccttaaagaagctgctctgtctactcatgga
tgggcaaaactctccgagttggtaattgatgagctaaaggagagggtgttatttatgata
ggtgattgcaaaagctag
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