Rhodamnia argentea (silver malletwood): 115745934
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Entry
115745934 CDS
T10595
Name
(RefSeq) U-box domain-containing protein 13-like isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115745934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115745934
Enzymes [BR:
rarg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115745934
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
U-box type E3
115745934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
zf-RING_UBOX
Neurochondrin
HEAT_2
KAP
zf-Nse
zf-C3HC4_4
Arm_2
HEAT_EZ
Adaptin_N
zf-C3HC4_2
zf-C3HC4
MCAfunc
V-ATPase_H_N
zf-RING_2
NESP55
zf-rbx1
ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
115745934
NCBI-ProteinID:
XP_030537429
UniProt:
A0A8B8PRN2
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Position
6:complement(30823459..30827822)
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AA seq
707 aa
AA seq
DB search
MEEDKGALAQSVIDAVNEIASISGYRGTIKKQYCNLARRLKLLTPLFEEIKDSKESMPEG
TIRALASLLGALSSAKELLRFGTEGSKIYVVLEREQIMNKYHEVTSQLEQALSGISYENL
DISDEVKEQVELVLGQFRRAKGRVDSPDVELYEELLALYNQSSDTTSEPAVLRRLVEKLE
LMKIADLKQESLALHEMVCASGGDPGESIEKISMLLKKIKDFVQTENLDMDPPTGEKNVF
PSSSGQSSVDNNQNTQVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHRTCP
KTQQNLSSTTLTPNYVLRSLIAQWCEVNGIEPPKPPSSSRPTKTISTCFPAECAKIELLL
RKLACGNPEEQRSAAGEIRLLAKRNADNRVAIAEAGAIPFLVRLLSTPDSRIQEHAVTAL
LNLSICDENKGNIVSSGAVPGIVLVLRTGSMEARENAAATLFSLSVVDEYKVTIGASGAI
PPLVLLLNEGTQRGKKDAATALFNLCIYQGNKGKAVRAGIVPTLMQLLTEPEGSMVDEAL
AVLAILASHTEGRAAIGAAKAVPVLVEFIRVGSPRNKENAAAVLVHLCAGDQYHLLEAKE
IGIMDPLVELAQNGTDRGKRKAAQLLERLSRFIEQQEEARAQAEAEAEILAQAEAEAEVQ
VQSETEVEVQVQTETEVQVQVQADIEAGADTQPSELPLTANVVDNDN
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacaaaggagcgttggctcagagcgtgatcgacgcagtcaacgagatagct
tccatctcgggttacagaggcacgatcaagaagcaatactgcaatctggcccggagattg
aagctgttgactccattgttcgaagagattaaggacagcaaggagtcaatgcccgaaggg
acgatcagagctctcgcctctctcctgggagctttgagttccgcgaaggagttgctgagg
tttgggaccgaagggagcaaaatttacgtggtcttagaaagggagcagattatgaataaa
tatcatgaggtgacctcccaactggaacaagctctaagtggaatttcctatgaaaacctg
gacatatcagatgaagtcaaggaacaggttgagctcgtccttggacaatttagaagagct
aaaggaagagttgattcacctgatgtcgagttgtatgaagagctcttagccctttataac
cagagtagtgacacaacctcggaaccagctgtcttaaggagattggttgaaaagctagag
ttaatgaagattgctgaccttaagcaggagtcactggctctacatgagatggtttgtgca
agtggtggagatcctggcgagagcattgagaagatatcaatgttgctgaagaaaattaaa
gactttgtgcagacagagaaccttgacatggatccgcctactggcgaaaaaaatgttttt
cccagttccagtgggcaatcatcagtcgataacaatcaaaatacacaggtcatcccagat
gatttccgttgcccaatatccttagagttgatgaaggatcctgttatcgtgtcaacaggc
cagacctatgaacgctcatgcattgagaaatggctggaagcgggtcataggacatgtcca
aagacacagcaaaacctttctagcacaactcttacacccaactatgtccttcgcagcctt
atagctcaatggtgtgaggttaatggcattgagccacccaaaccacccagcagctctcga
cccactaaaactatctcaacctgcttccctgctgaatgtgctaagattgaacttctcctg
cgcaagcttgcatgtgggaatcctgaggaacagcggtcagctgcaggtgagattcgcctt
cttgcaaagcgtaatgcagataaccgtgttgccattgctgaagcaggtgcaattcccttc
cttgtacgccttctttcaactcccgactcgcgcatccaagagcatgctgtcacagcactt
ctcaacctttcaatatgtgatgagaacaaaggtaatattgtctcctctggagccgttcca
ggcatagtccttgttctgaggactgggagtatggaagcgcgggaaaatgcagcggccaca
ctcttcagcctctcagttgtagatgagtataaagtaacaattggtgcatctggtgcaatt
cctccactcgtgttgcttctaaacgagggaacccagagggggaagaaggatgctgcaaca
gctctttttaatttgtgcatttatcaaggtaataaggggaaggctgttagggctggcatt
gtacccacactgatgcagcttctaactgaacctgaaggcagtatggtggatgaggcactg
gctgtactggcgatattagccagtcatactgaagggagggctgccatcggtgctgcaaag
gcagtgccagttctcgtagaatttattcgcgttggttctcctaggaacaaggagaacgcg
gctgctgttttggtgcatctttgtgctggagatcagtatcatctgttagaggcaaaggaa
attggaatcatggacccactggtggaattggcacaaaatggcacggacagagggaagcgg
aaggctgctcaattgcttgagcgattgagccgtttcattgagcagcaggaggaggctcgg
gcacaggccgaagccgaggccgagattctggcacaggctgaagccgaggccgaggttcag
gtacagagtgagaccgaggtcgaggttcaggtacagactgagactgaggttcaggttcag
gtacaggctgacatcgaggctggggccgacactcagccttcagagctgcctttgacagca
aatgtagttgataacgataactga
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