Rhodamnia argentea (silver malletwood): 115746859
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Entry
115746859 CDS
T10595
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115746859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115746859
03009 Ribosome biogenesis [BR:
rarg03009
]
115746859
04131 Membrane trafficking [BR:
rarg04131
]
115746859
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rarg04147
]
115746859
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115746859
Ribosome biogenesis [BR:
rarg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115746859
Membrane trafficking [BR:
rarg04131
]
SNARE
SNARE associated proteins
Others
115746859
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115746859
Exosome [BR:
rarg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115746859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
AAA_17
IstB_IS21
Viral_helicase1
ABC_tran
Vps4_C
NACHT
AAA_7
NB-ARC
AAA_lid_PRS2_C
AAA_24
TsaE
DUF815
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
115746859
NCBI-ProteinID:
XP_030538655
UniProt:
A0A8B8PV54
LinkDB
All DBs
Position
7:complement(7444962..7451022)
Genome browser
AA seq
805 aa
AA seq
DB search
MTNQAESSDAKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVALHPETMEKLQLFRGD
TILVKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGLTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFHTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFAE
AGTGAAGSDPFAASAGGADDDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccaagctgaatcctccgacgccaaggggacgaagagggacttcagcacagcg
attctggagcgcaagaaggctgccaatcgcctcgtcgtcgacgaggccatcaacgacgac
aattctgtggttgctctccatccggagaccatggagaagctccagctcttccgcggcgac
accatcctggtcaaggggaagaaaaggaaagacactgtttgcattgcacttgctgacgac
acatgcgaggagccaaagattaggatgaacaaagtggtgagatcaaacctgagggttagg
ctgggagatgttgtttcggtgcaccagtgtcctgatgtcaagtatggaaagcgtgttcac
atacttcctgtggatgacaccattgaagggcttactggaaatctctttgatgcattcttg
aagccttacttcctggaggcatatcgccctgtaaggaagggtgatctcttccttgttaga
ggaggaatgagaagtgtcgagttcaaggttattgagaccgaccctgccgagtattgtgtt
gttgccccagacacagagatcttctgcgagggagaacctgtgaggagggaggatgagaat
aggttagatgaggttggttatgacgatgttggtggtgttaggaagcaaatggctcaaatt
agggagctggtagagctaccattgagacatccacagttattcaaatcaattggtgtgaaa
ccaccgaaaggaatcctgctgtatggaccacctggatctgggaaaaccctcattgcaagg
gcagttgcaaatgaaactggtgctttctttttttgtatcaatggtccagaaatcatgtca
aagttggctggtgaaagtgaaagcaatctcaggaaagcttttgaggaagctgagaaaaat
gcaccttccatcatcttcattgatgagatcgattcaattgctccgaagcgagagaagact
catggagaagtcgagaggaggattgtttctcagctgctaacactcatggatggtttgaaa
tctcgtgcccatgtcatagttatcggagctactaaccgaccaaacagcattgacccagct
ttgagacgatttgggagatttgacagggaaatcgatattggtgttccagacgaagtgggg
cgccttgaagtcctccgcattcatacaaagaacatgaagcttgctgaagatgttgatttg
gaaagaatttctaaggacacacatggctatgttggtgctgatcttgctgctctctgcact
gaagctgcacttcagtgcatcagagagaagatggatgtcattgacttggaagatgagacg
atagatgcagagatattaaactccatggcagttacaaatgagcacttccatacagctctt
ggaacaagcaacccatctgctctgcgtgagacagtggttgaagtgccgaacgtgagctgg
gaagatattggcggtcttgagaatgtcaaaagagagcttcaagagactgttcaatatcca
gtggagcatcctgagaagtttgagaaatttggaatgtcaccttctaagggagtccttttc
tatggtcctcctggatgtggcaaaactcttctggccaaagctatagccaatgaatgtcag
gcaaattttatcagtgtgaaaggccctgagctgcttactatgtggtttggagagagtgag
gcgaacgtgcgtgaaatttttgacaaagcccgacaatctgctccgtgtgttctatttttt
gacgagcttgactcgattgctacacagagaggaagcagtgttggagatgctgggggtgct
gctgatagggttttgaaccaactgctcactgagatggatgggatgtctgcgaagaaaact
gtgttcatcattggagccaccaacaggccagacattatagaccctgcacttctacgtcca
ggccgtcttgatcaactgatttacatccctctccctgatgaggactctcgacatcaaatt
ttcaaggcatgcttgaggaaatctccaatctccaaagacgttgatctgagagctcttgct
aagtacacgcaagggttcagcggtgctgatatcacagaaatatgccagcgtgcttgcaaa
tatgccatcagagaaaacatcgagaaagatatcgagagggagagaaggagaagggacaat
ccagaagccatggaggaggacgttgaggatgaagtggcagagatcaaagccgctcatttc
gaggaatcgatgaagtatgctcgcaggagtgtaagtgatgctgatattaggaagtatcaa
gcttttgcccagacactccagcagtcgagagggttcggaagcgaatttcggtttgcagag
gccggtaccggtgctgcgggatcagatccattcgcagcttctgctggcggtgctgatgac
gatgacctctatagttaa
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