Rhodamnia argentea (silver malletwood): 115747604
Help
Entry
115747604 CDS
T10595
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115747604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rarg03009
]
115747604
03016 Transfer RNA biogenesis [BR:
rarg03016
]
115747604
03029 Mitochondrial biogenesis [BR:
rarg03029
]
115747604
Enzymes [BR:
rarg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
115747604
Ribosome biogenesis [BR:
rarg03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
115747604
Transfer RNA biogenesis [BR:
rarg03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
115747604
Mitochondrial biogenesis [BR:
rarg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
115747604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
DUF3097_N
Motif
Other DBs
NCBI-GeneID:
115747604
NCBI-ProteinID:
XP_048126996
LinkDB
All DBs
Position
10:complement(18973263..18980219)
Genome browser
AA seq
833 aa
AA seq
DB search
MGSDGSKRSATPRTLSVRKFAESRVSEVENLHSIVANRLSNNFRSRRNKRRRTTAHDNQL
ANRRHRKKQKDSQVAGADRNAAAPGKVPRRIRRRNELKQNPQSGFCTSGDGTRRLRTHVW
HVKRFTMTKLWGFYLPLGLQGRGRGSRALLKWYKQGVVVHDASYHFAVQLEGPQDSLSSL
LDRVLVPSPSAHPMDMSQSIISGVTYGRAMLHHVGTPLSKPIAPVIYMWRHLDQHNTGKV
QQDCALNGEGVPENIDGSVPIRRLFVWVHVSAFTEGYDALKCACQKEMDEMGSLIRCSSL
EGHLTKLEVMGVVEKPFQLKKHSSVEASKDEKKMECDLLHNEDGFPSCAILSLMVKDPRE
YKDEEAVCDSKMIAINTVDEVLAHVTEKQPSMTQPSDKGGGLFLLSQAHHDLWDAASGTR
TPIEENVLHTERHNKRMDFLCLDNYNSGMSNALHSSQSSRSCPIMLLRNGSADDHLKGWS
IILPLSWVKAFWIPFISKGAHAIGLREKHWIANNACLPYFPWDYPDCNAYTSLMAIEASA
SHSKADCRPPAVRALKVPIPPPWSAICPFDIAYAGGIDTPISSERSTSNGSSASSLTNST
SGVTSSRLQDHVCGFRGSVVRTNKELTCFLEDNYGGHSFLFPYKMGSGRSFLKALKDKSN
VGGLANGISRIMARHDLCFLRVTLHALKEGFFEEGAIVCAPRFTDISSRALRLENNESGL
QMPQPAATSYFKEVCPGEWEIQVPEDPIARESHRWPIGFVTTGFVRGSEKLTAEAFCEVN
YLSYLREEQWTEMSVGRRKEEIYVLVRNMRSSAYRLALATVVLEQREDDLEFM
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgggctctgatggaagtaaaagatcagcgactcctcgaactctcagtgtcagaaagttt
gcagaatctagagtttctgaagttgagaatctacactccatcgtagccaacagattgagc
aataattttcgctctcgaaggaataagaggaggagaaccacagcccatgacaaccaacta
gccaatagaaggcataggaagaagcaaaaggattcacaggtggctggtgctgatcgcaat
gctgcagctccaggcaaagttcctcgacgcatacgacgcagaaatgagctgaaacaaaat
ccccagagtggtttctgtacatctggggatggaactaggagacttagaactcatgtttgg
catgtgaagcggtttactatgaccaagttgtggggcttttaccttcctcttggtttgcag
ggcagagggaggggttcaagagctctcttgaagtggtataagcaaggagtagtcgtccat
gacgctagttaccattttgctgtccagttggagggtccacaggattctttgagttcgctg
ttagatagagtactagttccatctccatctgctcatccaatggacatgtctcagtcaatt
atttctggtgttacatatggaagggctatgcttcatcatgttggaacgcctctttcaaag
ccaattgctccagttatttatatgtggagacatttggaccagcataatactggtaaagtt
cagcaggattgtgctttaaatggggagggtgtacctgagaatatcgatggctctgttcca
attcgtcggctatttgtctgggtacatgtatcagcgtttactgaaggatatgatgctcta
aagtgtgcatgtcaaaaggagatggatgaaatgggtagtttgatccgttgctcttcgctt
gagggtcatcttacgaagttggaagttatgggtgttgtagaaaaaccttttcagttgaag
aagcattcttctgtcgaggctagtaaggacgaaaagaagatggaatgtgacttgcttcac
aatgaggacggttttccttcttgtgcaattctctctcttatggtcaaggatcctcgggaa
tacaaggatgaagaagctgtttgtgattcaaaaatgatagctattaacacagttgatgag
gttttagcacatgtaactgaaaagcagccatctatgacacaaccttcggacaaaggagga
ggtttattcctattgtcacaggcacatcatgatttgtgggatgctgcttcaggaacaaga
accccaattgaagagaatgttcttcacacggagaggcacaataagcgtatggatttcttg
tgcttggataattataattccgggatgtcaaatgctttacatagttcgcagtcttcaaga
tcctgccctataatgcttctaagaaatgggagcgcagatgaccatcttaagggatggtca
atcatactccccttgagttgggtcaaggccttctggattccttttatttccaagggggct
catgccataggtttgagggagaagcactggattgcaaacaatgcttgcttgccctacttt
ccatgggattatcctgattgcaatgcgtatacatcccttatggcaatcgaagcctctgct
tctcattcaaaagcagattgccgtcctcctgcagtcagagctctaaaagttcccattcca
cctccatggagtgctatttgcccttttgacatagcatatgctggtgggatagatactcca
atctccagtgaaagaagcacaagcaatggcagttctgcatcaagcttgacaaatagtacc
tcaggcgtgacatcatccagactccaagatcatgtgtgtggttttaggggttctgtagtt
aggactaacaaggagctgacctgcttccttgaagataactacggtggtcattcatttttg
tttccttacaaaatggggagcggtaggagtttcttgaaggctttgaaggacaagagcaat
gttggcggattggcaaatgggatctctcgaatcatggctcgtcatgacttatgtttccta
agggtgacactgcatgctttgaaggaaggtttcttcgaagaaggagcaattgtatgtgca
cctcgtttcactgatatatcatcaagggctttgaggctagaaaacaatgaaagtggtcta
caaatgccccaaccagctgcaacatcgtacttcaaagaggtttgtcctggggaatgggaa
atccaagtgccagaggacccaattgctagggagagtcaccgttggcctattggatttgtc
acaacaggatttgttcggggcagtgagaagctgacagcagaagctttttgtgaggtaaac
tatctatcttatcttagagaggagcagtggactgagatgtccgtgggacggaggaaagag
gagatatatgttctagtcaggaatatgaggtcttcagcatatagacttgctctagccact
gtcgttctggaacagcgggaagatgatttggaatttatgtaa
DBGET
integrated database retrieval system