Rhodamnia argentea (silver malletwood): 115747612
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Entry
115747612 CDS
T10595
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
115747612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rarg04131
]
115747612
03029 Mitochondrial biogenesis [BR:
rarg03029
]
115747612
Membrane trafficking [BR:
rarg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
115747612
Atg1 complex
115747612
Mitochondrial biogenesis [BR:
rarg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115747612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
115747612
NCBI-ProteinID:
XP_030539686
UniProt:
A0A8B8PZH9
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Position
10:complement(19824336..19828801)
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AA seq
591 aa
AA seq
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MDQIVSQFLLKSLHIILDSRIPSLHPNDQRSGHRTSVSRARKNDKWFNLVLGDRPAALEN
LNFWHRNLMDPMIIDVILVDEGSNSSSVDAYSAMKASVETVIERWVVHYESSRVTPNIND
SSLHKKIYKKLIVLLRSLYSQMRLLPAYRIFRQLSSSGQTYNLDLIYKVSTFSNPFSRAE
EEMMKEYTFAPVEASSGRFSVAVSYRKTLSDFNLEPATSLFPRIITDYVGSPATDPLRSF
PSFDKGVRATSFSLRGARPPSSAPFQRPHSWTSGFHRPAPFTQGHSLGGSPPTYCTYGSP
SPPTDMYSQRAQSYRSTSQRVNSYEECQLSPPFSPSPSPSPPTYFSSGSVGRNRGRSETA
PMTIPHPTASGNARYLSPNFSDPNRHSLPPLSPRHTRLDPSSQESPSGIRSFRKQESLRS
GELHNHYVNQKVTKDGRDDSGRFSGLLSSSGSPRIGFSRSSSRLSFQDDLDDGDFSCPFD
VDDVDPPASNAVDGREGSELTSSSPMGAKSQDAAVGVLVHMLRTASPLEQNSSCYSAQSL
NTEQEGGVATASGFFMPRKTTDALEELRSYREMKNLLRSKSGAHVLTKEEA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatagtatcacagttcctgttaaagagtttgcacattattttggattcgagg
attccttctctgcacccaaatgatcaaagaagcggccaccgtacatcggtttcccgagca
agaaagaatgacaaatggtttaacttagtattgggagaccgccctgctgccctggaaaac
ttgaacttttggcacaggaatctaatggacccaatgattatcgacgtgatacttgttgac
gaggggtctaattcctcatctgtggatgcttactctgctatgaaagcatctgttgagaca
gtcatagaaaggtgggttgttcattatgagtcttctagagttactcctaatatcaatgat
tcttctcttcacaagaagatatacaagaagttgatcgtactattgcgttctctttattcg
caaatgagactcctcccagcttataggatatttcggcagctaagttcatcaggccagaca
tataatttggatctcatatacaaagtatctacctttagtaatccgttctcacgggcagag
gaggagatgatgaaagaatatacttttgctcctgtggaggcctcttcaggacgttttagt
gtagctgtttcatatcgtaagacattgtctgatttcaacctggagcctgctacttcgttg
tttccgaggattattactgattacgttggtagtccagccactgacccacttaggtcgttc
ccctcttttgacaaaggtgttcgcgctacatctttttctttaagaggagcaaggccacct
tcttcagcaccatttcaacgcccacatagctggacaagtggattccacagaccagctcct
tttacacaaggtcattcccttggtgggtccccacctacgtactgcacatatggttctcca
tctcctcctactgacatgtattctcaacgagctcaaagctatagatccacatctcaaaga
gttaatagttatgaagagtgtcaactgtcgccccctttctctccatctccttccccttct
ccgccaacatacttttccagtggtagtgttggcagaaatcgtggacgatcagagaccgct
cccatgaccattccgcatccaacagcaagtggaaatgcaagatacttatctccaaacttt
tctgatccaaatagacattctcttccccctctatcacccaggcacacaaggcttgacccc
tcatcccaagagtccccatctggaatcagatcattccgaaaacaggagtctttgagatct
ggggagttgcataaccactatgtcaatcagaaggtcacaaaagatggtcgagatgattcg
gggcggttttcgggcttgttatcttcaagtggctctccgcgcatagggttttctagaagt
tccagtagattatctttccaagatgacttggatgatggcgacttttcatgcccttttgat
gttgatgatgtcgatccgccagccagcaatgctgttgatggcagggaaggttcagagtta
acttcatcgtcacctatgggcgcaaaatcgcaagatgccgctgtcggggttcttgttcac
atgttaagaacagcgtctccacttgaacaaaattccagttgttactcagcccagtccttg
aacacggaacaagagggaggcgtggctacagcttcgggattctttatgccacgtaagacc
acggatgcgctggaggagcttcggagttaccgagaaatgaagaacctcctacgctcgaaa
agtggagctcatgtcttaaccaaagaagaagcttga
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