KEGG   Rhodamnia argentea (silver malletwood): 115747758
Entry
115747758         CDS       T10595                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
  KO
K11797  PH-interacting protein
Organism
rarg  Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rarg04121]
    115747758
Ubiquitin system [BR:rarg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     115747758
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_EML WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Bromodomain VPS8_N Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Agenet
Other DBs
NCBI-GeneID: 115747758
NCBI-ProteinID: XP_030539885
UniProt: A0A8B8PYK4
LinkDB
Position
1:complement(28455495..28472459)
AA seq 1739 aa
MALRKYVPPCNASSAGMKPLSFSGRVNPNAQVTDPDQQKKMERNLDIDLKEVYFLIMHFL
SAGPCHRTYGQLWNELLEHQLLPRRYHSWYSRTGRHSGDEDDDGMSFPLGYNKLVERYPH
IAKDHLVKLLKQLLVSTASLSEGVDSGRAPTAADVPTLLGRGSFSLLKESDDDIKHPPPY
MRWPHKQADQVRGLSLREIGGGFSRHHRSPSIRAACYAIAKPSTMVQKMQNIKKIRGHRN
AVYCAIFDRTGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNALVASSS
NDCIIRVWRLPDGLPISVLRGHTGEVTAITFSPRPASVYQLLSSSDDGTCRLWDARNSQF
SPRIFVPKPSDSAAGRNGAPLSNSLTQNHQIFCCAFNANGTVFVTGSSDNLARVWNACKP
NKDESDQPNYEIDVLSGHENDVNYVQFSGCAAASRFSVADTIKEESVSKFKNSWYSHDNI
VTCSRDGSAIIWTPRSRRSHGRVGRWCRAYHLKVPPPPMPPQPSRGGPRQRILPTPRGVN
MIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTDSTYVLDVHPFNPRIAMSAGYD
GKTIVWDIWEGKPIRIYEISRFKLVDGKFSPDGTSITLSDDVGQLYILSTGQGESQNDAK
YDQFFLGDYRPLIQDTYGNVLDQETQLAPYRRNMQDLLCDSGMTPYEEPYQSRYQKRRLG
ALGVEWRPSSLRLAIGPDLSLGPDYQMLPLADLDVLIEPLPEFMDVMEWEPENPVQSDDN
DSEYNITEEYSSRGEPGSLDFDSSDDSECSAEDSGGDDSNKDIRRSKRRKQKAEVEIMTS
SGRRIKRRNLDEHDGDLLRSNRSRKQRNGRRKKRSSKSKALRPQRAAARNALSLFSRITG
ASTGEEEEVSESDLSESETNERDSDIQSADSEEPLQNEQIKLSKGKEVYKDLSKEVAANR
EHHDTPVTAGNKRRLILKLPVRDSNRLAPSQRREHTSDSLPYFVGSSSGIPRDITEGSSI
RLNEQNPQSSANANCKTVEKGRKESESNVDQIKLSLACQNGKIKWGGAKARSAKRPRLGE
TASLVPCGESSSHLEGHDRSENKENGILELERLSEVQDDRVKRNEETTCMNQRSFDNGTN
ENLGGVVNGQEHTKVIKCSVDDDSLEEVCVPSGERSPALAGEGADQLYDVEESHKPLSSE
LRNGSGVTTDIADAMKQEPRNKTDDCKSGLHDETCDNHLCMEYDIAQVPALNQNKRIGLA
KADGGLLGSDDNNDTSGSTLPNSNLHSNASRIFSAVYRRSKTTRTRTNLEGEASGVGEST
SNANTDDIGAQMDLRGGSPDLSHKTQSMGLKMRLRKCDAKTGIGDMELGHEHESEDPSQG
SESNHISRCKLPHEEWGSSSKATVGLRSTRNRRASCHLRDTSPPIERRKLSQPLRKGSWL
LLTSHEDGSRYIPQQGDEIVYLRQGHEEFIDSGGSKERGPWTVIKGNIGPAEFCKVESLE
YAIYPGSGESCCRMILRFVDPASSVFRKSFKLTLPEATGFPDFLVERTRFETTTQRNWTV
RDKCRVWWKNEGEDDGSWWEGRIVSVNPKSPEFDDSPWERYTIQYKSDPREKHRHSPWEL
FDADTQWEQPCIDDEILNKLLSAINKLEKSGNYNQDRYGIQKLTQVSQKSSFINRFPVPF
TLEVIKARLENNYYRSSEAMKHDIGVLLSNAETHFGKSPELSSKMRRLSEWFARTLSGL
NT seq 5220 nt   +upstreamnt  +downstreamnt
atggctcttcgaaagtacgttcctccttgtaacgcttcttctgctggtatgaaacctttg
agtttctccggtagagtgaacccgaatgctcaggttacagatccagaccaacagaagaaa
atggaaagaaacttggacattgacctcaaggaggtttactttttgatcatgcatttccta
tcagctggaccatgccacagaacttatggacagctttggaatgagctacttgaacaccaa
ctcttacctagaagatatcattcatggtattcaaggactgggaggcacagtggtgatgag
gatgatgatggcatgtcattcccgttaggctacaataagttggtagaaaggtatcctcac
attgcaaaggatcacttggtgaagcttttaaagcaattattagtaagtacagcttctcta
tcagaaggtgtggacagtggacgggctccaactgcagccgatgtgcctactctgttagga
aggggttcattttccttattgaaggagagtgatgatgacatcaagcatccgcctccttac
atgcgatggcctcataaacaggctgatcaggttcgtggattaagtttgagggaaattggg
ggtggtttcagtcggcaccatcgttcaccatccattcgcgctgcatgttatgcaattgct
aaaccatcaacaatggttcagaagatgcagaacattaagaagattcggggacaccgaaat
gctgtatattgtgcaatatttgatcgcactgggagatatgttataactggctcagatgat
cgacttgtaaaaatctggtcaatggaaactgcatattgcctggcaagttgtcgtgggcat
gaaggcgacataactgacttagctgtgagttccaacaatgccttggtggcatcttcttca
aatgactgcatcatacgtgtttggcgtcttcctgacgggcttccaatttcagttctaagg
ggccatactggagaagttactgccattacttttagtccaagacctgcttctgtataccag
ctactgtcgtcgtcggatgatggaacatgcaggttatgggacgctagaaattcccagttt
agtccaaggatatttgttccaaagccttcagatagtgcagctggaaggaatggcgctcca
ctgtcaaactctctgacccaaaatcatcaaatattctgttgtgctttcaatgctaacgga
actgtatttgttactgggagttcagataatcttgcaagggtttggaatgcttgtaagccc
aacaaagatgagtctgaccagccaaattacgagattgacgtgttgtctggccatgagaat
gatgtcaattacgtgcaatttagtggctgcgctgcagcatcaagattttccgtggctgac
actataaaagaagagagtgtttccaaatttaaaaactcttggtatagtcacgacaacatc
gtcacttgctctcgtgatggcagtgcaattatctggaccccaagatcacggagatcacat
ggaagagtcggccgctggtgtcgagcttatcatcttaaggttcctcctccaccaatgccg
cctcaaccttcacgagggggtccaagacagagaattcttccaaccccacgtggtgtaaat
atgatagtatggagcctggacaatcgattcgttcttgctgctattatggattgcagaata
tgcgtttggaatgcatctgatggtagcttagtacattcattgactggccacactgattcg
acatatgttcttgatgttcatccttttaatccaaggatagctatgagtgcggggtacgac
ggcaaaacaatagtttgggatatatgggaaggaaaacctatacggatatacgaaatttca
cgcttcaagttggtcgatggcaaattttctccggatgggacatcaatcactctttcagat
gatgttggtcagctttatatattaagcactggccagggcgagtcacagaatgatgccaag
tatgatcagtttttcctgggggactatcggcctcttattcaagatacttatggcaatgta
cttgaccaggaaactcagcttgctccttatcgacgcaatatgcaggatctcctttgtgat
tcgggtatgacaccttacgaagaaccctaccagagcagataccagaaacgccgactcgga
gctttaggcgttgagtggcgtccttcttctctaagacttgccattgggccagacctaagt
ctaggcccagattatcaaatgctccccttggcagatctggatgtgctaattgaacccttg
ccagaatttatggatgttatggagtgggagcctgaaaatcctgtgcaaagtgatgataat
gattcggagtataatatcactgaggaatattcgtcccgaggggagccgggaagtttagat
tttgactcctctgatgattctgaatgcagtgctgaagacagtggtggtgatgattcaaat
aaggatatccgcagatcaaaaaggagaaaacaaaaggcagaggtagagatcatgacatct
tcaggtcggcgcattaaaaggaggaatttggatgagcatgatggtgatttattaagaagt
aaccgatcaagaaaacagaggaatggtaggagaaagaaaaggtcttccaaatctaaggca
ttgagacctcaaagagctgctgctcggaatgctctctctttgttctctagaattactgga
gcatctacaggtgaagaagaagaagtatcagaatctgacttgtcggagagtgagactaat
gagcgagattcagacattcagagtgctgattctgaggaaccattacaaaacgagcaaatt
aaactatcaaaaggaaaggaggtatataaggatttgtccaaggaagtggctgccaaccgt
gaacatcatgatactcctgtcactgctgggaacaagcggagattgattcttaaattgcca
gttcgtgattcgaataggcttgctccttcccaaagaagagaacatacatctgacagccta
ccttattttgtcggttcatcatctgggattcctcgagacattactgaagggagcagcatt
cgtttaaatgaacagaatccacagtcctctgctaatgccaattgcaaaacagttgaaaaa
ggacgaaaagaaagtgagagtaatgttgatcagataaagctgagtcttgcatgccagaat
ggtaaaattaagtggggaggtgccaaagcacgctcagcgaaacgaccaagacttggagaa
acagcatcactggtgccgtgtggggagagtagttcacatttggaaggtcatgacaggagc
gaaaataaagagaatgggattttagaacttgaaagactttcagaagttcaggatgacagg
gttaaaagaaatgaagaaactacatgcatgaatcagagaagctttgataatggaacaaac
gagaatttgggtggtgtagtaaatggccaggagcacaccaaagtcattaaatgcagtgtt
gatgatgattcattagaggaggtttgcgttccttctggggaaagatctcctgctcttgca
ggggagggagctgaccagctctatgatgttgaggagagccataaaccactctccagtgag
ttgagaaatggatcaggagttacgactgatattgctgatgctatgaagcaagagccgaga
aacaagactgatgactgtaaaagtggcttgcacgatgaaacctgtgataatcatttgtgc
atggaatatgacattgcgcaagtgcctgcccttaaccagaacaagagaatcggtctagca
aaagcggatggcggattactaggatcagacgataacaatgatacatctggttcaactcta
cctaactcaaacttgcattcaaatgcaagcaggatcttcagtgctgtatatagaaggtcg
aaaacaactaggactagaactaatctagaaggagaagctagtggagtgggagaaagtact
tcaaatgcaaatactgatgatatcggtgctcaaatggacttacgcggaggatctcctgat
ttgtcgcataagacgcagtccatgggactgaagatgaggcttcgaaaatgtgatgcaaaa
actgggataggagacatggagttgggtcatgaacatgaatcagaggatccatcacagggt
tctgagagtaatcacattagtagatgcaagcttccacatgaagaatgggggtcaagttca
aaggctacagttggattgaggtctactagaaacaggagagcgagttgtcaccttcgtgac
actagtcctccaatagaaaggaggaagttaagtcaacccttgaggaaaggttcatggttg
ttgttgacatcacatgaagatggatctcgttacattccacagcagggggatgaaatagta
tatttgagacaagggcatgaggaatttattgatagtggtggctccaaagaacgaggcccc
tggacagtgataaaggggaacattggaccagcggaattttgtaaagttgaaagccttgaa
tatgccatttatccagggtctggggaaagctgctgcagaatgatacttcgatttgttgat
cccgcttccagtgtgtttcgtaaatcgtttaaattaactcttcctgaagcaactggcttc
ccagacttccttgtagaaagaactcggtttgagactactacgcagaggaattggacagtc
cgggacaaatgcagagtctggtggaaaaatgaaggcgaagatgacggtagttggtgggag
ggtcggatcgtttctgtgaaccctaagtctcctgaatttgacgatagcccatgggagagg
tacactatccagtacaagagtgatcccagggagaagcatcgtcacagtccatgggaactc
tttgatgctgatacacaatgggagcagccgtgtattgatgatgagatcctaaataaactt
ctctcagccattaacaagctagagaagtcggggaactataaccaggaccgctacggcata
cagaagttgacccaggtttctcagaaatcaagtttcattaacaggttcccagttccattt
actcttgaggtgattaaagcaaggttagaaaacaattactatcgaagttcagaggcaatg
aagcatgatattggagtactgctatcaaatgctgaaacccactttgggaaaagtcccgag
ctctcatcgaaaatgaggcgcttatcagagtggtttgcacggacgctatctggtctgtga

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