Rhodamnia argentea (silver malletwood): 115747997
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Entry
115747997 CDS
T10595
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115747997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115747997
03036 Chromosome and associated proteins [BR:
rarg03036
]
115747997
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115747997
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115747997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
115747997
NCBI-ProteinID:
XP_030540206
UniProt:
A0A8B8PZH6
LinkDB
All DBs
Position
3:33823735..33857776
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AA seq
868 aa
AA seq
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MSVPTSPFGRPTSSAPAPQSEFGQANNANNSPFVVTSFGGTTPFGSPAGGSVYRGTSTGV
FGGGSTRTPSPFSSEAAFGAFASSAGGFGSSTPAFRTTSTPAFVTDSAPSFGATRTPSLG
TRGNAFGPAKGPIFGSGGAFGASSNPDFGASCSSSLSFGSSQAFGPSTTAFRSSQFGSES
RGAHTGSHVATRTFGGTEFGNSSFGGQHRGSRVAPFAPPTEAEPGEMLPFKLQSICGMTV
PVYKCKSHEELRWEDYQRGDKGGPNHIGQSGASVGRPAAFPAIPQPTFCQPSPFSSTTAS
NAVSSAPASGTTSNPISFTSSKELSITAPSPFVLKPSNNAGFWPSPNTSPFGCSSSLTSV
VRSQPSAFEFSAPPSIWSSSVSATLGSSPPVISAPTTQSSPLLWSTTPPIAKSASAFRQT
PTSFSQTTAPFGQITTPTLGQTHVFSTASSGSGGSLFPSTPSPVLSTNAAAIGQTNPFCS
LPFQTSEAAETSRVSSLGNLGQTQAAGTGGFSSQYAFGQRHCEQSSINGSSSVVQRALVT
SPSGNLPAVQQLSIGCTGAGSPVQYGISSMPVADKPSPVRKSPLLSARHLSLRQTRLPPR
KYQPTEGVQRVPFFYDGDNTPSKPEAAQVIPRRNPRSMVISPEYWPAREQKPCPLMKTSP
DENDGVPKDGPLEEQTDFVKANQKMKGVHDDSSLQNDVIPKGAGESAIGYDCDASIEALM
PKLCQPEYYTEPHAKELAAKERAEPGFCFRVKDFVVGRLGYGHIKFVGETDVRRLDLESL
IHFNYREVIVYTDESKKPPTGQGLNKPAEVTLLNMKYIDKKTGKQYIEGPKVEKYKEMLK
KAAKKQGAEFVSYDPIKGEWKFKVRHFS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttccaaccagcccttttgggaggccaactagtagcgcccctgcgccacaatca
gaattcgggcaggctaacaatgcaaataacagtccttttgtggtcacatcttttggtggt
acaacaccttttggttcaccggcaggtggctctgtatataggggaacttcaacaggagtt
ttcgggggtggttctactcgaaccccttcgcccttctcttccgaagctgcctttggtgct
tttgcatcatcagctggtggctttggttcgagcacccccgcctttcgaactacgagcaca
ccggcgtttgttactgatagtgctccatcatttggagctacaagaaccccttccttaggt
actagaggaaatgcatttggtccagctaaaggtcccatctttgggtctggaggtgcattt
ggtgcttccagtaatccagattttggggcttcttgtagctcatcattaagctttgggtct
tctcaagcttttgggccatcaacaactgcatttaggagcagccagtttggatcagaatct
cgtggagctcatactgggtctcacgtagctacacgaacatttggcgggactgaattcgga
aattcatcctttggaggtcagcataggggaagtcgcgttgctcctttcgctccaccgact
gaggcagagcctggggaaatgcttcctttcaagctccagtcaatttgcggtatgactgtg
cctgtctacaaatgtaaaagccatgaggaacttagatgggaggattaccagcggggggac
aaaggtggaccaaatcacattggtcagtctggcgctagcgttggtcgccccgctgcattt
cccgccattcctcagcctactttttgtcagccatctcctttttcttccactacagcttcc
aatgcagtttcttctgccccagcttctggaaccacatctaacccaatttcttttacgtca
tctaaagagctttcaattacagctcccagtccttttgttctaaaaccttctaacaatgca
gggttttggccatcacctaacacttccccttttggttgttcttcttcattaacttctgtc
gttagatcacagccttctgcatttgaatttagtgcaccgccatccatatggtcttcttca
gtctcagctacacttggttcatcaccaccggttattagtgctcccactactcagtcttcc
ccactactttggtctactacccccccaattgccaaatctgcttctgcatttagacaaact
cctacttcctttagccaaactactgctccatttggccaaattacaaccccaactttgggt
caaacgcacgtatttagtacggcttccagtggctctggtgggagcttattcccaagtact
ccatctccagttctctctactaatgcagccgcaatcggtcaaacaaatcccttttgttct
ttgccttttcaaacatctgaagctgcagagacttctcgtgttagttcccttggcaacttg
gggcagacacaagcagctggtacaggtggctttagctcacaatatgcttttggtcagcgt
cattgtgaacaatcgtctatcaacgggagttcttcagttgttcaacgagcactggtcaca
agtccttctggaaacctccctgccgtacagcagttgtcgataggctgcactggagctggt
tccccggtccaatatggaatttctagcatgcctgttgcggataaaccatctcctgttcga
aaatctcctttgctgtctgctcggcatctctcactgaggcaaactaggctgcctccaagg
aagtaccaacccacagagggtgttcaaagggttccatttttctatgatggagacaataca
cctagcaaaccagaggcggctcaagtcattcctaggaggaacccaagatctatggttatc
agtcctgaatattggcctgcaagagaacagaagccatgtccattgatgaaaacttctcca
gatgaaaatgatggtgttcccaaagatggtcccttggaggagcaaactgacttcgtcaag
gccaaccagaaaatgaagggagttcatgacgattcctctcttcagaatgatgtgattcct
aaaggagctggtgagtctgccattgggtatgattgtgatgctagcatcgaggcacttatg
ccgaagctctgtcagcccgagtactacacagaaccgcatgccaaagaattagcagccaag
gaaagagctgaaccaggattttgctttcgagtcaaagattttgtggttggacggcttggt
tatggtcacattaaattcgtaggggaaaccgatgtgagaaggcttgatcttgagtccctt
attcacttcaactatcgcgaagtgattgtgtacacagatgagagcaagaaaccgccaaca
gggcaagggctcaataagccagctgaggtgactcttcttaatatgaagtacattgataag
aagactggaaagcagtacatcgaggggcccaaagttgagaagtacaaggaaatgctcaag
aaggcggctaagaaacaaggcgcagagtttgtgtcgtatgaccccatcaaaggagagtgg
aagttcaaggttcgccatttcagttga
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