Rhodamnia argentea (silver malletwood): 115748363
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Entry
115748363 CDS
T10595
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
115748363
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
115748363
NCBI-ProteinID:
XP_030540685
UniProt:
A0A8B8Q2U6
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Position
6:15307641..15314087
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AA seq
1125 aa
AA seq
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MSSSRPSQSSSNSARSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRAMGAPSGDQR
PRSDKVTTAYLHQIQKGKTIQPFGCLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEQ
PVLGIGTDVRTIFTAPSASALHKVFGFADVSLLNPILVHCKTSGKPFYGIVHRVTGSIII
DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRAM
AYKFHDDDHGEVVSEMTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKV
LQDENLPFDLTLCGSTMRAPHTCHLQYMENMNSIASLVMAVVINEDNEEVHDPNSVQPQK
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQMVEKNILRTQTLLC
DMLMRDAPLGIVSQTPNVMDLVRCDGAALLYKSKSYKLGVSPDDEHLHGIASWLSEYHMD
STGLSTDSLYDAGFPGALAVGDIVCGMAAVRISAKDMIFWFRSPTASEIRWGGAKHDPDE
KDDNRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNALKENEAIDMNTSTIH
TRLNDLKIQGIQELEAVTSEMVRLIETATVPILAVDADGLVNGWNTKIAELTGLSVEKAL
GKHLLTLVDDSSVDIVKKMLHLALHGKEEKNIQFEIKTHDSRADSGPISLIANACASRDI
QENVVGVCFVAQDITGQKMVMDKFTRIEGEYKAIVQNPNPLIPPIFGTDEFGWCSEWNSA
MEKLTGWKREEMIDKMLLGEVFGMHTACCRLKNQEAFINLSVVLNSAMTGKEPEKVPFGF
FARGGKFVDCLLCVSKKFDGEGSVTGIFCFLQLASQELQQALHLQRLTEKTSLKRLKQLA
YIKRQIRNPLSGIIFSHKILEGTELGHEQKLLLHTSAQCQSQLGKILDDSDLDSITDGYL
ELEMVEFTLHQVLVASMSQVMIKSNGKGVRIVNNAPEEAMTETLYGDSVRLQQVLADFLS
ISVNYTPAGSQLLIAARLTKDHLGESVQLAHLELRLTYPGGGIPEALLNQMFENDGEITE
EGISLLISRKLVKLMSGDVQYLREAGKSTFIISVELAVANKSGLA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcaagacccagccaatcatccagcaactcagcaaggtcgaggcatagcgcg
aggataattgctcaaaccactgtagatgctaagctgcatgctgatttcgaggagtctggt
agttcctttgactattcaagctcagtgcgggcaatgggcgccccaagtggagatcagcga
ccaagatccgacaaagtaacaacggcttacctccatcagatacagaaagggaagacgatc
cagccattcggttgccttttagcattggacgaaaaaactttcaaggtcattgcgtacagt
gagaatgcgcctgagatgctgaccatggtgagccacgcagttccgagcgttggggagcag
ccggtcctcgggattgggactgacgtcaggaccatatttactgcacccagcgcctctgct
ctccataaggtctttggatttgctgatgtttctctattgaatcccatcttagtccattgt
aaaacttctggaaagcccttctatggaattgtccatagagtgaccggtagcataatcatt
gattttgaacctgtgaagccttatgaagtccctatgacggccgctggagccttgcagtca
tataagcttgcggctaaagccattgcacgcttgcagtctttgcctagtgggagcatggaa
aggctttgtgacacgatggttcaggaagtctttgaactaacgggttacgacagggctatg
gcatataagttccatgatgatgatcacggcgaagtagtctcggagatgacaaagccaggc
ctggagccatatctgggtctgcattatcctgccacggatattcctcaagctgcacggttt
ctgttcatgaagaataaggtccgcatgattgttgattgccgggcaaaacacgtgaaggtg
cttcaggatgagaatcttccctttgatctcaccttgtgcggttcgaccatgagggcccca
cacacttgtcatttacagtacatggaaaacatgaactctattgcttctctggttatggca
gttgtcatcaatgaggataacgaagaagtccacgaccccaactctgtgcagcctcaaaag
agaaagagactttggggtttagtagtttgccataacacaactccaaggtttgttccattc
ccacttcgatatgcctgtgagtttcttgcccaagtgtttgctatccatgtcaacaaggag
cttgagctagaaaatcaaatggtcgagaaaaatatcttgcgaacccagacgctcttgtgc
gatatgctgatgcgtgatgcgcctctaggcattgtgtctcagaccccaaatgtgatggac
cttgttcgatgcgatggtgctgcccttctgtataaaagcaagtcatataagctgggagta
agtccggacgatgaacatttgcatggcattgcatcgtggttgtccgagtaccatatggat
tccacgggattgagtacagatagcttgtatgatgcgggattcccaggggctcttgctgtt
ggcgacattgtgtgtgggatggctgctgtgagaataagcgcaaaggacatgattttctgg
ttccgctcaccaactgcgtctgaaattcgttggggtggagcgaagcatgaccctgatgag
aaggatgataataggaaaatgcatccaaggtcatccttcaaggcttttcttgaagtagtc
aagacaaggagtttaccttggaaagactttgagatggacgcaatccactcgctgcagctt
atcttgaggaacgccttgaaagaaaatgaagcgattgacatgaacacctcaaccatccat
acgaggcttaatgaccttaaaattcaagggattcaagaattggaagcagtgacaagtgag
atggtccgtctgattgaaacagccacagttccgatactggctgtcgatgctgatgggctg
gttaacggttggaatacaaaaatcgctgagctaactggtctgtctgttgagaaagcatta
gggaagcatttgctcacactggtggacgattcttctgtcgatatagtgaagaaaatgtta
cacttggcattacatggcaaggaagagaagaatatccagtttgagattaaaacacatgat
tctagagcggactctgggccaatcagcttaattgcgaatgcctgcgctagcagggacatt
caagagaatgtcgtgggtgtgtgtttcgtcgctcaggacattactggtcagaaaatggta
atggacaagttcactcgaatcgaaggtgagtataaagcgattgtgcaaaatccgaacccc
ttgatacccccgatttttggaacagatgaattcggctggtgctctgagtggaattcagct
atggaaaaattgactgggtggaaacgggaagaaatgatagataaaatgctattgggggag
gttttcgggatgcacacggcttgctgtcgtctcaagaatcaagaagcttttattaatctt
agtgtagtgcttaatagtgctatgactggcaaagagccggagaaggttccgtttggtttc
tttgctcggggtgggaagtttgtggactgcctactgtgcgtgagtaagaaatttgacgga
gagggttcggtgactggaattttttgcttcttgcagctcgcaagccaagagctgcagcag
gcgcttcatctccaacggttaactgaaaaaacttccttgaagaggttaaaacaattagct
tacatcaaaaggcagattcgaaaccctctctcggggataatattttctcacaaaattctg
gagggtactgagttaggacatgaacagaagctgttgctacataccagtgctcaatgccaa
agccagctgggcaagatccttgatgactcagatctggatagcatcactgacggatacttg
gaattggaaatggtcgagtttactctccatcaagtcttggtggcttccatgagtcaagtc
atgataaagagcaatggaaagggtgtacgaatcgtcaataatgcaccggaagaagccatg
accgaaactttatacggggatagtgtcaggcttcaacaggtcttagctgatttcttgtcg
atatcggttaactacaccccggcaggaagccaacttcttattgcagctcgtttgaccaaa
gatcacttgggagaatctgttcaacttgcacacctggagctaagattgacctaccctggt
ggtgggataccggaagcgctgctgaaccagatgtttgaaaatgatggagagataactgag
gaaggcatcagcctgcttatcagcagaaagttggtgaagctaatgagcggagatgtgcag
tacctgagggaagccggaaaatccaccttcatcatatccgtcgaactcgctgtagctaat
aagtcgggtctagcttga
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