Rhodamnia argentea (silver malletwood): 115748467
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Entry
115748467 CDS
T10595
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115748467
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115748467
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Cytochrom_D1
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
PROPPIN
Tricorn_2nd
Beta-prop_SCAP
WDR54
WD40_RFWD3
Beta-prop_DCAF4
Utp8_b_propeller
Motif
Other DBs
NCBI-GeneID:
115748467
NCBI-ProteinID:
XP_030540822
UniProt:
A0A8B8Q165
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Position
6:2574853..2581683
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AA seq
461 aa
AA seq
DB search
MSRHFKRTKICNEEGSGTQSSGAHGSGGNLGDLDHEIAQLTKRRSEPNEHLRKARLGGLK
LPVSTLRMLAARESNYSGRGRFSLSDSCHVLSRCLPIYGPQKVDTMGSRAYVSQFSADGS
LFVAAFQGSHIRIYNVDKGWKVQKDIMAKSLQWTITDTCLSPDQRYLVYSSMSPLVHIVS
IESAATESLANVTEIHDGLDFASNNNGDYEDFSIFSVKFSTDGRELVAASSDGAIYVYDL
LANKVGLQILAHQVDVNTVCFADESGHIIYSGSDDNFCKVWDRRCLSTAGQAAGVLTGHL
EGITFIDSRGDGRYLISNGKDQSTKLWDIRKMTSNCPTFHRRRDYDWDYRWMDYPEEDRN
LKHPYDQSLTTYKGHSVLYTLIRCYFSPAYSTGQKYIYTGSGDCIVYIYDLVSGKEVAKL
DHHNEPVRDCSWHPFYPLLVTSSWDGVIAKWEFPWENNITG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcatttcaagcgtacaaaaatctgcaacgaggagggttctggtacccagtcc
agcggagctcatggatccggtggaaatttaggtgacttagaccatgagattgctcagttg
acaaagcgcagatccgagcccaatgaacatttgagaaaggctaggctggggggattgaaa
ctgcctgtctctaccctcagaatgttggctgctcgagagagcaattattcagggaggggg
aggttctcattgtctgatagctgtcatgtgttgagtagatgtttgcctatatatggccct
caaaaggtggatacgatgggatcccgtgcatatgtttctcagttttctgctgatggttcg
ctgtttgtggcagccttccaggggagccatattaggatatacaacgtggataagggctgg
aaagttcagaaggacataatggcaaaaagtttgcaatggacaattacagacacttgtctt
tctcctgatcaacgttacctcgtctattccagtatgtcaccccttgtccacattgtcagt
attgaatctgctgcaacagagtcgcttgcgaatgtcacggaaatacatgatggcttggat
tttgcttctaataacaatggtgactatgaagatttttctatcttctccgtgaagttctcg
accgatgggcgagagcttgttgctgcaagcagtgatggggcaatatatgtttatgatctt
ctagcaaacaaggttggccttcaaattctcgctcatcaggttgatgttaacaccgtatgc
tttgcggatgaaagtggccacatcatatattctggaagtgatgataatttctgtaaggtc
tgggaccgtcgttgtctttctacagcaggacaagcagctggagttttgacaggacatcta
gaaggcattacgtttatcgatagtcgtggagatggacgctacctcatttcaaatggaaag
gaccagtccaccaaattatgggatatacgaaagatgacttcgaattgtccaacattccac
aggcgaagagactatgattgggattacaggtggatggactacccagaggaagatagaaac
ttgaaacatccctacgatcagtcactgactacatataaaggtcactcagtgttgtatact
ctgatacgatgttacttctcccccgcctatagcactggtcagaagtatatctacactgga
tctggtgactgcatagtttatatatatgatctggtgagtggaaaggaagttgccaaactc
gaccatcataacgaacctgtaagggattgcagttggcatccattttatccgttgctggtc
acctcttcgtgggatggcgtgattgccaagtgggaattcccatgggaaaacaacatcacc
gggtaa
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