Rhodamnia argentea (silver malletwood): 115749174
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Entry
115749174 CDS
T10595
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03082
ATP-dependent chromatin remodeling
rarg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115749174
03083 Polycomb repressive complex
115749174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rarg03036
]
115749174
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115749174
Histone modification proteins
HAT complexes
HATB complex
115749174
HDAC complexes
Sin3A-HDAC complex
115749174
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115749174
PRC2.2
115749174
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115749174
Heterochromatin formation proteins
Other heterochromatin formation proteins
115749174
Chromatin remodeling factors
NuRD complex
115749174
NuRF complex
115749174
NuRF complex (fruit fly)
115749174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
115749174
NCBI-ProteinID:
XP_030541739
UniProt:
A0A8B8Q3R9
LinkDB
All DBs
Position
4:14311265..14318717
Genome browser
AA seq
505 aa
AA seq
DB search
MESQPQAPKKRGRKPKPKEDKKEEPHHHQPQPPPAKSSSSSSAGAKERKSHQQHAVDEKY
ARWKSLVPVLYDWLANHNLLWPSLSCRWGPQLEQATYKNRQRLYISEQTDGSVPNTLVIA
NCEVVKPRVAAAEHVSQFNEEARSPFIRKYKTIIHPGEVNRIRELPQNPNIVATHTDSPD
VLIWDVESQPNRHAVYGATASRPNLILTGHQENAEFALAMCPAEPFVLSGGKDKTVVLWS
IQDHITASATDQTTNKSPGSGGSIIKKTGEGNEETGNGPSVGPRGIYCGHEDTVEDVAFC
PSTAQEFCSVGDDSCLILWDARVGTNPVAKVEKAHNGDLHCVDWNPHDNNLILTGSADNS
VNMFDRRNLTSNGVGSPVYKFEGHKAAVLCVQWSPDKTSVFGSSAEDGLLNIWDYERVDK
KVERAPNAPAGLFFQHAGHRDKIVDFHWNAADPWTMVSVSDDCDTAGGGGTLQIWRMSDL
IYRPEEEVLTELENFKAHVLECSKT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcagccacaagctccgaagaagcgaggacggaagccgaagccgaaggaggac
aagaaggaggagccccaccaccaccagccgcagccgccgccggccaagtcgtcgtcgtcg
tcgtcggcgggtgccaaggagaggaagtcgcatcagcagcacgcggtcgacgagaagtac
gcccgttggaagtccctcgtccccgtcctctacgactggctcgccaaccacaacctcctc
tggccttccctctcttgccggtggggcccgcaactcgagcaagcaacttataagaatcgg
cagcggctctacatttctgagcagactgatggtagtgttccaaatactttggtcatagca
aactgtgaagttgtgaaacctagagttgcggctgcagagcacgtgtcccagtttaatgag
gaagcacgatctccattcataaggaagtacaagacaattatacatcctggagaggttaac
agaatcagggaacttcctcagaatcccaatattgtggcaactcacactgacagcccagat
gttctcatttgggacgtggagtcgcagcctaaccggcatgctgtctatggagctacagct
tctcgtccgaatctgattttaactggacatcaagagaatgctgaatttgcccttgcaatg
tgtccagctgaaccctttgttctttctggaggaaaagataagacggtggttttgtggagt
atccaagaccatataacagcatctgcaacagatcaaacaacaaataaatctccaggatct
ggaggatccatcattaagaagactggggaaggtaatgaggaaactggtaatggcccttct
gttggaccacgaggaatctactgtggacatgaggatactgttgaagatgtggctttttgt
ccatccactgcacaggaattttgtagcgttggtgatgattcatgccttatattgtgggat
gcacgagtcggcactaatccagttgctaaggttgagaaggcacataatggtgacctccat
tgtgtggattggaatcctcatgacaataacctaattttaactgggtcggcagataactct
gttaacatgtttgatcggcgaaatctcacttctaatggagttggttcaccagtctacaag
tttgagggccataaggcagctgtactttgtgtgcagtggtctccagacaagacttccgtc
tttgggagttcggctgaagacggtctcttgaacatttgggattatgagagggttgataaa
aaggtcgagagggctccaaatgctcctgcgggattgtttttccagcatgctgggcacagg
gacaaaattgttgacttccactggaacgcggctgatccatggacaatggtaagcgtatct
gacgactgtgataccgccggaggaggtggtacattgcagatatggcgaatgagcgatttg
atctacaggccggaagaagaggttttgactgagctcgagaatttcaaggcccatgtactg
gaatgctcaaagacttga
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