Rhodamnia argentea (silver malletwood): 115749310
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Entry
115749310 CDS
T10595
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115749310
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115749310
Surveillance factors
Other surveillance factors
115749310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
115749310
NCBI-ProteinID:
XP_048137533
UniProt:
A0ABM3HLQ6
LinkDB
All DBs
Position
6:24173286..24182664
Genome browser
AA seq
1602 aa
AA seq
DB search
MAEGKLDLPDDLLSSKPADRSFPPPKMEALGGQFEEKVLMGPNDESKDQVASESSIPLSP
QWLYAKPTETKMEMRAPSSASVGNSGDPTQKENWRLEGTEDKKDWRRAATDNESGRRWRE
EERETSLLGSRRDRRKPDRRVDSVPVRETNEGRTLAASDKWSDGNARTAGHEARRDSKWS
SRWGPEDKDKESRNEKRADAEKEDGHVDNSPLLGSNRGAPERESESRDKWRPRHRMEVHS
SGSTPYRAAPGFGTERGRVEGSHMGFTVGRGRSSTMGRSLGAIGAAHSDKSESVPGKPIV
LTDSFCYPRAKLLDIYRKQKVEQSFASMPDDMEELAPIAQADVAEPLAFVTPDADEEAVL
GDIWRGKITGSGAVYNSFRKGRSTENVTGLGDVESADEGKQGILSLVPTEENGDTFQELL
GSDNSRADDNTASLNLLVSSYGAEDVKNQGVEQKIAGEIIHHGESVDNGTRGSYEIDGPY
FATSQTNIANSGTGTLSAFTDQSQFQEIGGRSKLPNNSTSLFGLIPPLQHQGGNIHHLSS
NEAKESERSISADELSLYYLDPQGEIQGPFLGLDIISWFEQGFFGTDLPVRLADAPEGKP
FQELGEVMPHLKEGIHAIATGADQILKLDEASALGGKLETGVPAAAPAGKVDDLYIMENR
SLPEIRNMSAQNVQRIVSESGVPHLSHLEMGFNDFAAQDEEIVFPGRPGSSGHPIGRSTG
NIHDASLKPLSHSSVQAELKAPSMQNQNDNMMHPFGLLWSEIEATNAKHTSASNLPSAMG
RGPQFGGISDPALIADNWPDSYRRNAAFDYPNLYPETVASRNFPRMEQESNRLDLSEQLL
SRQLQHHHLQQQNLLPFHANSGHSILEQMAGEQMAHQQQLAAHAVPEMEHLRALQLQQQR
QHQLQRQLQQQQQFQHQQKLLQEQQQSQVQQVLLEQILRNRMHDPGLAQSPVDPLRANNA
LDRAILEQQLLNELKQRSHHPARHIDPSLEQRTEAKFARMPPELQELLIARAQRGQLQPL
DHHILQEQLQARQFPMGMGLPPNLEERRLGSGWPVDETDQFLRMHSSHRAHSSGFSPLDF
YQQQQGPSNEDQLSFFDRNPSLQERMRQGSYEPSGPPFDRSISLPTGNAGVNLDVLNAMT
RVHGLDMQESSTRTKSAAQAKFASELHPRGATRSLLPNQFHTSQLDALDGHWSENNGQLA
NDWMESRIQQLHIGAERQKREQFGKITSEDPSSWMSDGQDDDKSKQLLMDLLHQNSGHQP
AQYADVSEGVPGERRPISGFYSSSNTLDRQFNMLQDREAGLSNSFPVGSYGSNSSDRASS
FENRDELPFRMDSGALAAADPFLSGIHGSGMGFHTNPSRNDSISAHTKELAEAEGRKGMS
KSESKLKGSLFEIQEATAEQTLLAATDHGGVPINSFSRHASLGAAAGENTVFYDEGIGNQ
YPEQISKDHVRVILSKSQDNMLLRGPSQEGPSELVSDPLARLKSAVPSVPDGSRQDQGGN
PTKQGVEDIAAAKKDMRFRRTSSCNDADVSEASFIDMLKSTKKTAPQEPQSAAGLSESLE
GIQAGRSGKKKGKKGKQIDPALLGFKVTSNRIMMGEIQRIDD
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggcaagttggatctgcccgacgatctgctgtcctcgaagccggccgatcgc
tccttcccccctcccaaaatggaagctctgggaggacagtttgaggaaaaggtgctcatg
gggccaaatgatgagtcaaaagatcaagtggcatcagagagcagcatacctttgtcccct
caatggctctatgccaaaccaaccgagactaagatggaaatgcgagctccatcttcagcg
tcagttggaaattcgggtgatcccactcaaaaggagaactggcgtttggaagggactgag
gacaaaaaagactggaggagagctgccactgacaatgaaagtggccgtcgctggcgtgaa
gaggaaagggaaactagcctacttggcagtaggagagaccgcaggaaaccagatcgtcgt
gttgacagcgttccggttcgggaaactaatgaaggtagaacattggctgccagtgataag
tggagcgatggtaatgctcgcacagctgggcatgaagcacgacgtgatagcaagtggtct
tcaaggtggggtcctgaggacaaggacaaagaatctcgcaatgaaaagagggcagatgca
gagaaggaagatggtcatgttgacaattcaccacttttgggcagcaatcgtggtgctcct
gagcgtgaatctgagtcccgtgataagtggaggccacgccatagaatggaagttcattcc
agtggttcgactccctaccgcgctgctcctggatttggaactgagagaggaagggtggag
ggttcacatatggggtttaccgttggacgaggaaggtccagtacgatgggaagatctttg
ggtgccatcggtgctgctcattctgacaagagtgaaagcgtccctggaaaaccaatagtc
ttaaccgattctttttgttacccaagggcaaagcttcttgacatttatcgcaagcaaaaa
gtcgaacaatcctttgcttccatgcctgatgacatggaagaattagcgcccatagctcaa
gcagacgttgctgaaccgctagctttcgtaacccctgatgctgacgaggaggctgtcctt
ggtgatatatggaggggtaagatcactggcagtggagctgtgtataattcatttagaaaa
ggcagatcaacggaaaatgttactggtcttggtgatgttgaatctgctgacgaggggaaa
cagggcattctctccttggtacccactgaagagaatggcgataccttccaagaacttttg
ggaagcgataactctcgagctgatgataacactgctagcttgaacttattagtttcatct
tatggtgcagaggatgttaaaaaccaaggagtggagcagaaaattgctggtgaaattatt
catcatggggagtctgttgataatggtacccgaggatcatatgaaatagatggtccttac
tttgccacttcccagacaaatattgccaatagtgggacggggacactatctgcttttacc
gatcaatctcaatttcaagaaattggtggcagatccaagcttcctaataactcaacttct
ctatttggattgatccctcctcttcaacaccagggtggaaacatccatcatttaagttct
aatgaggcaaaagagtcagagaggagtatttccgcggatgagcttagtttatactacctt
gatcctcaaggggagatacaaggaccttttcttgggttggacatcatttcgtggtttgaa
caggggttttttggcactgacttaccagtccgcctggcagatgcccctgaaggaaaacct
tttcaagaattgggtgaggtgatgccgcatcttaaggagggcatccatgccattgccact
ggtgctgatcagattttgaaattagatgaagctagtgctttaggtggtaagttggagact
ggtgtgcctgctgctgctcctgctggtaaagttgatgatttatacatcatggaaaatcgg
tcgttaccagagattaggaatatgtcggctcagaatgtccaacgcatagtatctgaatct
ggtgtcccacatctgtctcatttggagatggggtttaatgattttgctgcccaagatgaa
gaaattgttttcccaggaagaccaggaagtagtggccatcctattggaagatctactgga
aacatccacgatgcttctctgaaacctctgagccactcttctgttcaagctgagttgaaa
gcacccagcatgcaaaaccaaaatgataacatgatgcatccttttggtttactttggtct
gagattgaagccactaatgcaaagcatacctctgcatccaacttgccttctgccatggga
aggggtcctcaatttggaggcatttccgacccagctctcattgcagataattggcctgat
tcatacagaaggaatgcagcttttgactacccgaacttgtatccggaaactgtggcttct
cgaaactttccacgcatggaacaggaatcaaaccgtcttgatctatcggagcaactattg
tcaaggcaacttcagcatcaccatctccaacagcaaaacctgttaccttttcatgcaaat
tctggccattccattttggaacaaatggctggtgaacaaatggcacaccagcagcagctg
gccgcccatgctgtaccggaaatggaacatctaagggcactacagctccaacagcagcga
caacatcagcttcaacgtcagttgcagcagcagcagcagtttcagcatcagcaaaaactt
ctgcaggagcaacagcagtctcaagtgcaacaggtcctacttgaacaaatcctgagaaac
cgtatgcatgatcctggccttgcacagtcccctgttgatcctctgagagccaacaatgct
cttgatcgggctatattggaacaacagcttctcaatgagctgaaacaacgctctcatcat
cctgccagacatattgatccatcacttgagcagagaaccgaggcaaaattcgctcgtatg
ccaccagagcttcaagagttactcatagctcgtgctcagcgtggacaacttcagcctttg
gaccatcatatactgcaagagcaacttcaagctaggcagttcccaatgggaatggggcta
cctcccaatttggaagaaaggcgccttggttctggctggccagttgatgaaactgatcag
ttccttaggatgcacagtagtcatcgagctcactcatcagggtttagcccactagatttt
tatcagcaacaacaggggccatccaatgaagaccagctgagcttctttgacaggaatcct
tcgctacaggagcgtatgagacaaggttcttatgaacctagcgggccgccttttgaccgt
tcaatttctttaccaactggaaatgctggagtgaatctggatgtcctaaatgctatgact
cgtgttcatggtttggacatgcaagagtctagcacaagaacaaaatctgctgctcaagca
aagtttgcttcggaattgcaccctcgaggtgccacccgctctttacttcctaaccaattt
catacttctcagctggatgcactggatggtcactggtctgagaataatgggcagctcgca
aatgattggatggaatctcgaattcagcaattgcatattggtgctgaacgccaaaaaagg
gaacaatttggtaaaattacttctgaggacccgagttcgtggatgtcagatggacaagat
gatgacaagtcaaagcagcttctgatggatttgcttcatcagaattctggtcatcaaccc
gcccagtatgcagatgttagcgagggagtaccgggggagagaaggcctatatctggcttt
tactctagttcgaacactctggatcgtcaatttaatatgcttcaggacagagaagctggt
ttaagcaactcgtttcctgttggttcctatggatcaaattcctctgatcgtgccagcagt
tttgaaaacagagatgagttgccattcagaatggattctggggcattggctgcggcagat
ccattcttgtccggtattcacggatctgggatgggttttcacactaatccaagcaggaac
gacagtatttcagctcatacaaaggagcttgcggaggcagaggggaggaagggtatgtca
aaaagtgagagcaaattaaagggctcgctctttgagattcaagaagccacggctgaacaa
acattattggctgctacagatcatggtggagtacctatcaattcctttagcaggcatgct
tcactcggtgctgctgcaggtgaaaatacagtcttctatgacgaaggaattggaaaccag
tatcctgaacagataagcaaggatcatgtgcgagtcattttgtccaaaagtcaagacaat
atgctgctcagaggcccatcccaggaaggaccgtcagagcttgtgtctgatcctcttgcg
aggctcaaaagtgctgttcctagtgttcctgatggttcgagacaagaccaaggaggtaat
ccaacaaagcaaggtgttgaggacattgcggctgccaagaaagatatgcggttcaggcgt
acttcatcttgcaatgacgcagatgtgtcggaagcgtcgtttattgacatgctaaaaagc
acgaagaagactgcaccacaagaaccccaatcggcagcaggactttcagaatcattagaa
ggaattcaagctggacgaagtggaaagaagaaagggaagaaagggaagcaaatcgatccc
gcccttttgggtttcaaagtcaccagcaatcgcatcatgatgggcgaaattcaacgtata
gatgattaa
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