Rhodamnia argentea (silver malletwood): 115749335
Help
Entry
115749335 CDS
T10595
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03013
Nucleocytoplasmic transport
rarg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115749335
03015 mRNA surveillance pathway
115749335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115749335
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115749335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
115749335
NCBI-ProteinID:
XP_048136460
LinkDB
All DBs
Position
6:24778230..24788631
Genome browser
AA seq
657 aa
AA seq
DB search
MLCYLVRVLYCVYVWDRGAFKLELRCPQKAHGVAADPDPDWNLESLLPELDALEKKLNAS
SVIPVPFTKNQSRKMVKGRPSTFIMRVSDDEIDDLDDSDEEATSARLVTRKKFNFNNLYT
SDESDDESALEVQPYLMDEGNSEEAALFELIHEYQLEVKDEIRNQISALETDLINGSEKS
TLALVRVEKYRDARRDMDKKIDTQYQRKLAEALDNHLTAIQRDHELKSQIEEKKIKSDAA
YEEARRKEKALYEEKLRQEKAILEAEAKLREEAERAATLEAERRAKEAADKLAAEASERV
ARAVAQQEAVGLRTDGSLANSSSLSEKIQSNQTKKSESATNIMIGDVVKAAKSALIVEQG
RLQKFKEIDEQNREIQINLNKDFSSNERHVARLIRQIRGTKDNVRSKASELLKIFNNPAC
PQSISIAAFARKVVSHCESPDNAAFACAHVIVMVTSKMPHVMDVLLAEFHMACIFTVPKY
IIYSKTAFESKEAYYKALGFREDNGKLENVKDYLKRLESYMRLYGALVQTEPMNFQNAHG
LKEGWAWLARFLNTFPANVYTAVALNAFLQMAGFALFRRYRRQFKKMLNVISEDYLGALK
ARRHSELTPIIAEIQSYIEDDKFLKEPEGRALQDSLLSSVMVPESSYASTQSNGYYH
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgctctgttatttagttcgagtgctgtactgtgtgtacgtgtgggacaggggggcgttt
aaattagagcttcggtgcccacaaaaggcccatggggttgccgccgatcccgatcccgat
tggaatctcgagagtctcttaccggagctcgatgccttggaaaagaagcttaatgcttct
tcggttattcctgtgccttttaccaagaaccagtcacggaagatggtgaagggcagaccg
agtacatttataatgcgggtatctgatgacgagatagatgatctggatgacagtgatgag
gaggcgactagtgctcgtttagtgaccaggaaaaaattcaatttcaataatttatacacg
agtgatgagagtgatgatgagtcagctctggaagtgcaaccatacttgatggatgaaggg
aactcagaggaagctgctttatttgagctcatacatgaatatcagcttgaagtcaaggat
gagattaggaaccaaatctcagcactagagacagatttgattaatggaagtgaaaagtcg
acattggcgcttgtgcgagttgaaaaatacagagatgcaagacgagatatggacaagaaa
atcgatactcaatatcaacgcaaacttgcagaagcccttgataatcacttgacagctatc
caacgggatcatgaattgaaatcacagattgaagaaaagaaaatcaaaagtgatgcagct
tatgaagaggctagaagaaaggaaaaggcactttatgaagaaaagcttcgccaagagaaa
gccatattagaagcagaggccaagttaagagaggaggcagaaagagctgctactttggag
gctgagaggagagcaaaagaagctgcagataaattggctgctgaagcctcagagagagtg
gctcgtgcagtggcccaacaggaagcagtaggactacgtactgatggaagtctggcaaat
tcgagttctctgtctgagaaaatccagtcaaatcaaacaaagaagtcagaatcagctacc
aatataatgataggtgatgtggtgaaggctgcaaaaagtgccctcattgtagagcaggga
agactacagaagttcaaagagattgatgagcagaaccgggaaatacaaataaacttgaat
aaggatttcagcagcaatgagaggcatgtagctaggttgatcagacagatacgggggaca
aaggacaatgtcagatccaaagcaagtgaactattaaagatattcaataatcctgcttgc
cctcagtccattagcattgcagcatttgcgagaaaggttgtttcccattgtgaaagccct
gataatgctgcattcgcatgtgcccatgtcattgtgatggttacatcaaagatgcctcac
gtaatggatgttcttcttgcggagttccacatggcttgcatatttacagtcccaaagtat
ataatctactcaaagactgcatttgaatcaaaagaggcatactacaaagctcttggattc
cgagaagacaatgggaaactagaaaatgttaaagattacttgaaacggctggaatcttac
atgagactctatggagcgcttgtgcagactgaacctatgaattttcaaaatgctcatggc
ctcaaagaaggatgggcatggcttgctcgattcttaaacacatttcctgccaatgtctac
acagctgttgccttgaatgccttcttgcagatggcgggctttgccctttttagaagatac
cgtcgtcagttcaagaagatgctgaatgttatctctgaagactatttgggtgcattaaaa
gcacgcaggcactctgagttgacgccaattattgcggaaattcagtcatacatagaagac
gacaagttccttaaggaaccagaaggaagggccctgcaggattctttgctctccagtgtt
atggtgcccgagtctagttatgcatctacccaatcaaatggatactaccactga
DBGET
integrated database retrieval system
