Rhodamnia argentea (silver malletwood): 115749374
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Entry
115749374 CDS
T10595
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115749374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115749374
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115749374
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
DUF4722
Motif
Other DBs
NCBI-GeneID:
115749374
NCBI-ProteinID:
XP_030542024
UniProt:
A0A8B8Q4K7
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Position
6:24490464..24493672
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AA seq
342 aa
AA seq
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MFGSSSPFGTPSSAPAFGSGFGTSAFSTPFSSQAQQQQQQQTPSFQQPASAGFGFPSPFA
TPQPAATPFGGGQLTTQMAPVAPLPFSLADRDIQAIVDAYKEEPGNPKYAFKHLLFSVTD
PQYRVKPASVSDIMWAEAVGKLEGMESADRERLWPQLVQGFKELSNRLKLQDEVVHSDAE
RLKMTQSNVKMLQRHFQADTLPWIQRMRLKEQGLQRRLLRVMRIVEAMESKGYRLPLVKG
EAELAEKLAAITRQLKGSGAELSRRVQNLLAISRVQANDIGATGAIYLPGSTKIHDQSLA
DLQEVLQQQTEAIARLGNVLKRDMRDMDIIMAEDTEMTEHTS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgttcggatcctcctcacccttcggtactccgtcctccgcgccagcattcggctctggt
ttcgggacctctgctttttcgactccgttctcttcccaagctcagcaacagcagcaacag
cagacgccatcgttccagcaaccggcgtccgccgggttcggcttcccgtctccgttcgcg
acgccgcagccggccgcgactcctttcggcggtggccagttgacgactcagatggctccc
gtggctcctcttcctttctcgctcgccgatcgggacattcaagctatcgttgatgcgtac
aaggaagagcctgggaaccctaagtatgcttttaagcatttgttgttcagcgtcaccgat
ccgcaatatagagtgaagcctgccagtgtatcagatatcatgtgggcggaggctgtgggg
aagttggagggtatggagagtgctgaccgggaacgcctgtggcctcagcttgttcagggc
ttcaaggagctttccaatcgcctcaagctccaagatgaagtcgttcattcagatgcagag
agactaaaaatgacgcagagtaatgtgaagatgcttcagagacattttcaagctgacacg
cttccctggatccagagaatgagactgaaagagcaaggccttcaaagacgccttttgagg
gtaatgagaatagtggaggcaatggagagtaaaggatatcgattgcctttagtaaaaggg
gaagctgagttggcagagaagctggctgcaatcactagacagctgaaaggatccggagca
gaactatcgaggagggtccagaacttgctggcgatatctcgagttcaagcaaatgatatt
ggggcaactggtgctatatacctcccaggatcgaccaaaatacatgaccagagccttgct
gacttgcaggaggtcttgcaacaacagactgaggcgattgcgaggcttgggaacgtattg
aagagagatatgagggacatggacatcataatggctgaggacaccgagatgacagaacac
acgagctga
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