Rhodamnia argentea (silver malletwood): 115749785
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Entry
115749785 CDS
T10595
Name
(RefSeq) LOW QUALITY PROTEIN: N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115749785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115749785
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
115749785
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115749785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
115749785
NCBI-ProteinID:
XP_030542649
UniProt:
A0A8B8Q6C6
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All DBs
Position
2:complement(31469437..31472385)
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AA seq
402 aa
AA seq
DB search
MTTSSSTLSPTLLLPCSCRHGASTLKKLQTLNPNSPIGLSSFLKTMKRPRPSPPSTPPTX
SNHPPPPSPPPPRRKNRLNPQSLTAETLEWVPLDLTESELSLPLTFPTGQTFRWKRTGPL
RFTGAVGPHLVSLKHRKDGDVAYCVHGDRPDGAGARSALLDFLNADIRLGEIWEVFSASD
PRFAELARLLRGARVLRQDPLECLIQFLCSSNNNIARITKMVDFVSSLGRCLGTVEGLEF
YEFPSLQRLMAVSEKEFREAGFGYRAKYIVGTVKALQSKPGGGVEWLISLRGLDLQDAIA
ALCTLPGVGSKVAACVALFSLDQHHAIPVDTHVWQIATRYLLPELAGARLTAKLAGQVAE
AFVSKYGKYAGWAQTMLFIAELPSQKAIVPSHCQTIQEDKRG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtcgtcgtccactctttctcctaccttgcttctcccttgcagttgcaggcat
ggagcttctacgctgaagaaactccaaaccctaaaccccaactccccgataggactctcc
tctttcctgaaaaccatgaagagaccaagaccatcaccaccatccactcctccgaccncc
tcaaaccatccaccgcctccgtcaccaccaccgccgcggcgaaaaaaccgtctcaatccg
caatcgctcaccgccgaaaccctagagtgggtcccgctcgacctcaccgagtccgagctc
tccttgcccctcaccttccccaccggccaaaccttcaggtggaaacgcactggccccctc
cggttcaccggcgcggtcggccctcacctcgtctccctcaagcaccgcaaggatggcgac
gtcgcgtattgcgtgcacggtgatcggcccgatggcgcgggagctcgatcggcattgctg
gatttccttaacgccgacattcgattgggtgagatctgggaggtgttctcggcctcggat
ccgcgcttcgctgagctggcgaggctcctgcgcggggctcgcgtgctgaggcaggatcct
ctggagtgcttgattcaatttctctgttcttcgaataacaacattgcgagaatcaccaaa
atggtggatttcgtttcgtctttggggaggtgtctggggactgtggagggtttggagttc
tatgagttcccgtcgctacagcgactcatggccgtctctgagaaagaattcagggaggct
ggtttcggttacagggccaagtatattgtgggcaccgttaaggctttgcagtcaaaacct
ggcggtggtgtggagtggcttatatcactgcgtggattggatctacaggatgctattgct
gctctctgtactttacctggagttggttctaaagttgcagcatgcgtagctctcttctct
cttgatcaacatcatgccattcctgttgatacgcatgtgtggcaaattgctaccaggtat
ctattacctgagcttgctggtgcacgacttacagccaagctcgctggccaagtagcagag
gcttttgtgagcaagtatgggaaatatgctggttgggctcagactatgcttttcattgct
gagttaccttctcaaaaggccattgtaccatcacattgtcagactatccaggaagataaa
agaggttga
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