Rhodamnia argentea (silver malletwood): 115749895
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Entry
115749895 CDS
T10595
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115749895
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115749895
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
115749895
NCBI-ProteinID:
XP_030542775
UniProt:
A0A8B8Q6P5
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Position
2:2330865..2337473
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AA seq
663 aa
AA seq
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MGLCSSKKLKDQVSDPQKLRVQEVMPTPGVHLHIQHHQVIMDNGIVQVTLSKPDGIVTGV
RYNGVDNLLEIRNQESNRGYWDLVWNAPGSKGIFDVIKGTCFNVIVENEEQVELSFVRTW
DFSLEGKYVPLNIDKRFIMLRGSSGFYSYAIYDHLAEWPPFEIGETRITFKLRKDKFHRM
AIGDDRQRKMPLPDDRLPGRCQTLAYPEAVKLVNPVDPELRGEVDDKYQYSGNNKDIQVH
GWISGDPAVGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSAHYAGKDLVPKFGPGE
PWKKVFGPVFIYLNSASVGDDPCWLWEDAKIQMMNEVERWPYNFPASEDFPKSHQRGNVR
GRLLVQDRYVSNDCIVAKRAYVGLAPLGDAGSWQRECKGYQFWTQADNDGYFSINNVRTG
DYNLYAWVPGFIGDYRHDDIITISSGLDHDMGDLLYEPPRDGATLWEIGIPDRSAAEFYV
PDPDASYINRLYVHHPDRFRQYGLWSRYGELYPEKDLVYTIGVSDHTKDWFFAQVPRRKQ
DGTHEGTTWQIKFNLSYVDQSKSYKLRIALASATLAELQVRVNDPKARRPLFTSGLIGRD
NSIARHGIQGLYWLFNVNVPGTLLNEGANTIFLTQPRCDSPFQGLMYDYLRLEGPQSHPS
GLK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgtgtagttccaagaagttgaaggaccaagtttctgatcctcaaaaactccga
gtacaagaagtcatgcctactccgggagttcatctgcacatccaacatcatcaagtgatc
atggataatggcattgtgcaggtcacgttatcgaaaccagatggaatagtcactggagta
cggtacaacggtgtcgacaatttattggaaatccgtaaccaagaatctaacagaggatac
tgggacctggtttggaatgcaccgggaagcaagggaatattcgacgtgattaaaggtaca
tgtttcaatgtaatagtggagaacgaggaacaggttgaactttcatttgtgagaacctgg
gatttctctcttgaggggaagtatgtgcccttaaacatagataaaaggttcattatgctt
cgtggatcgtcaggcttttactcttacgccatttatgaccatttggcggaatggcctccc
tttgaaattggtgaaactaggatcactttcaagctcagaaaagacaaatttcatcgcatg
gccataggagatgataggcaaaggaaaatgccactaccagatgaccggttaccgggaaga
tgccaaactcttgcatatcctgaagctgtcaaacttgttaatcctgtggatccagagctt
agaggagaggtggatgacaagtaccagtactcaggcaacaacaaggatatccaagttcat
ggttggattagcggtgatccagctgttgggttctggcaaattactcccagtgatgagttc
cgatctggtggaccgctcaaacaaagcctaacttcccatgttggcccaacgactcttgct
atttttctcagtgcacattacgcgggaaaggatctggtgccgaagtttggacctggtgaa
ccgtggaaaaaagttttcggtcctgttttcatctatcttaattctgcatctgtgggggac
gatccatgctggctgtgggaagatgctaagattcagatgatgaatgaagttgaaaggtgg
ccctacaatttccctgcttctgaagatttccccaaatcacaccaaaggggtaatgtcagg
ggcaggctgttagtccaggacaggtatgttagcaatgactgcattgtggcaaaaagagct
tatgttgggttggctccactaggagatgctggatcttggcaaagagaatgtaagggctat
caattttggacgcaagctgataacgacgggtatttctccatcaataacgtaagaactggt
gactataacctgtatgcatgggtccccggtttcattggagattaccggcacgacgatatc
atcactatttcatcaggtttggaccatgacatgggtgatctgttatatgagcctcctaga
gatggggccactttgtgggaaataggtattcccgatcgctcggctgcagaattttatgtc
cctgatcctgatgcatcgtacatcaacagactttatgtgcaccatcctgataggtttagg
cagtatgggttatggagcagatatggagaactttatcccgagaaggatttggtctataca
attggtgttagtgaccatactaaagattggtttttcgctcaagtccccaggaggaaacag
gatggtactcatgaaggaaccacatggcagatcaagttcaatctaagctacgttgatcag
agcaaatcatacaagctccgaattgcacttgcatcagctacgctagcagaattgcaggta
cgagttaatgatccgaaggcgagacgccctctttttacgagtggacttataggaagggac
aactcgatcgctagacacgggattcaagggctctactggctcttcaatgtgaatgtccct
ggtactctgctaaacgagggggcaaataccatattcctgactcaacctagatgcgacagc
ccttttcaagggctcatgtatgactacttgcgtcttgaaggcccccaatctcacccttct
gggttgaagtag
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