Rhodamnia argentea (silver malletwood): 115749896
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Entry
115749896 CDS
T10595
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115749896
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115749896
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
DUF6575
Motif
Other DBs
NCBI-GeneID:
115749896
NCBI-ProteinID:
XP_030542776
UniProt:
A0A8B8Q6Q3
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Position
2:2337935..2342746
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AA seq
659 aa
AA seq
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MCFEDEFKMSHLGVQLHIQDRHVVMDNGIVRVTLSKPEGIVTGIRYDGIDNLLEVLNDES
NRGYWDLVWNAPGSSTGIFDVIKGTSFRVVVQSDEQVELSFTRTYDPSLEGKLVPLNIDK
RFIMLRGSSGFYSYAVYEHLKDWPGFSLGETRITFKLRKDKFHYMAMADNRQRYLPLPDD
RTAPRGQPLAYLEAVLLVDPIEPELKGEVDDKYQYSCDNKDSKVHGWICSDPPVGFWLIT
PSNEFRSGGPLKQNLTSHVGPTTLAVFLSAHYTGDDLVPKFQAGEEWKKVFGPVFLHVNS
LSDPIDPLFLWEEAKLQMMVEVESWPYSFVASEDFPTSDQRGNVRGRLLVFDRYVSNDYI
SAKSAYVGLAPPGDVGSWQRECKDYQFWTRADEDGYFSIDDARAGDYNLYAWVPGCIGDY
KYGFPISVTPGSNTDVGDLVYKPPRDGPTVWEIGIPDRSAVEFYVPDPDPKYINKLYVNH
PDRFRQYGLWERYAELYPDGDLVYTVGASDYSKDWFFAQVTRKKDDKTYQGTTWQIKFAL
ANVDKSGVYKLRIAVASATLSELQVRVNNPKSTPVFSSGLIGRDNSIARHGIHGLYWLYS
VDIKGSWLSEGDNIVFLTQPRSSGPFQGIMYDYIRLEAPSSSSSTSTSTAASSSGHLRS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcgaagacgaattcaaaatgtcacatttgggagtgcaattgcatattcaagat
cgccatgtggtgatggacaacggcattgtccgggtgactctatcaaagccagaaggcatt
gtgaccggcattcgatatgacggcattgacaatctacttgaagttcttaacgatgagtcc
aacagaggttattgggatcttgtatggaatgcaccaggaagttccacagggatatttgac
gtgattaaaggaacaagttttagggtggtagtacaaagtgacgagcaggtggagctctcg
ttcacaagaacttatgatccttcccttgaaggcaagctcgttcccctcaacattgataaa
agatttataatgttgcgtggtagctcgggcttctactcttacgccgtctatgagcacctg
aaggactggccagggttcagcctcggcgaaacaaggatcactttcaagcttaggaaagac
aagttccattatatggcaatggctgacaataggcaaaggtacttgccccttccggacgac
cgtacggcaccacgaggccaacctcttgcctacctcgaagccgtcttgctcgtcgatccg
atcgaacctgagctcaaaggggaggtggacgacaaataccaatattcatgtgacaacaag
gacagcaaggtgcacggttggatctgcagcgatccgccggtgggattctggctgatcact
cccagcaacgagttccgatccggcgggcccctcaagcagaacctcacctcccacgtcggc
cccaccaccttagcggtgttcctgagtgcccattacacgggagacgatctggtgccaaag
ttccaggccggagaggagtggaagaaagtgtttggccctgtgtttctccacgtcaactcc
ctctccgatcccatcgatcccctttttctctgggaggaagctaagttgcagatgatggtg
gaagtagagagctggccttacagttttgtggcttcagaagattttcccacctcagaccag
cgaggcaatgtccgaggcagattactagtctttgaccggtacgtgagcaacgattatata
tccgccaaaagtgcctacgttgggttagctccaccgggcgatgtcggttcgtggcaacgc
gaatgcaaggactaccaattctggactagagcagatgaggacgggtatttctccatcgac
gacgcacgggccggcgactacaatctctacgcgtgggtccctggatgcattggcgattac
aagtatggctttccgatctcggtgacgccaggcagcaacactgacgtgggcgatctagtg
tacaagcccccaagagacgggccgacggtgtgggaaattgggatccccgaccgctccgct
gtggaattctacgtgcccgatcccgaccccaagtacatcaacaagctctacgtcaaccat
cctgacaggtttaggcaatatgggctatgggaaagatatgccgagctgtatcccgacgga
gatttggtttacaccgtcggcgctagcgactactccaaggattggttctttgctcaggtt
actaggaagaaggatgataaaacatatcagggcacaacatggcagatcaagttcgccctc
gcgaacgtggacaagagcggcgtttacaagctccggatagcggtcgcgtccgccacgctt
tccgagttacaggtacgggtaaacaacccgaagtcgaccccggtgttctcgagcggattg
atcgggagggacaactcgatcgcgaggcacggaatccacgggctctactggctgtacagt
gtggacatcaagggtagttggcttagcgaaggggacaacatcgtcttcctcacgcaacca
aggagcagcggtccgttccagggaattatgtacgactatattcgtctcgaagctccttcg
tcgtcatcgtcaacttcaacttcaacagcggcatcatcttcgggacatttgcgcagttga
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