Rhodamnia argentea (silver malletwood): 115750018
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Entry
115750018 CDS
T10595
Name
(RefSeq) general transcription factor IIF subunit 2 isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115750018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rarg03021
]
115750018
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
115750018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
Tau95
WHD_UBR1
TFIIF_beta_N
DUF7863
DUF1722
WHD_2nd_SelB_bact
Motif
Other DBs
NCBI-GeneID:
115750018
NCBI-ProteinID:
XP_030542999
UniProt:
A0A8B8Q7C2
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Position
5:3811619..3815250
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AA seq
285 aa
AA seq
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MDDKRSNGTASNDGPGSGTKAATTSTNDYANASYVCSGFVDTSKAERSVWLMKCPPVVSR
SLSLASPPAFEGGGDGVASSVPAAKVIFSVDLLHGGEDNSEFMMELASTESGNVPRRYSM
EMSKDFIPMSVFSESSQGKISVEGKILHKFDMRPHGENIETYGKLCRERTTKCMNRSRQI
QVIDHDTGSLMRTMPLMEKKKLPTKVPETKRTRRDRGEMEEIAFKLFERQPNWTLRQLIQ
ETDQPEQFLKDILKDLAVYNNKGPNQGTYELKPEYRKSTREPTSG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaaacgaagcaatggcaccgccagcaacgacggccccggcagcggaaccaaa
gccgccaccacctccaccaacgactatgcgaacgccagctatgtctgtagcgggttcgtc
gacacgagcaaagccgagagatcggtatggctcatgaaatgcccgcccgtcgtatcccgg
tctctgtccctggcgagcccgcccgcgttcgaaggaggcggagatggcgtcgcgtcctcc
gtccccgccgccaaggtcattttctccgtcgatcttctccacggcggcgaagataactct
gagtttatgatggaattggcttccactgaatctggaaacgtaccaaggcggtactccatg
gaaatgtctaaggacttcatcccgatgtctgttttttcagagtcttctcaaggaaaaatc
tctgtggagggaaagatcctgcacaaatttgatatgaggccccatggtgagaacattgag
acttatggaaaactctgccgtgaacgaacaaccaagtgtatgaacagatctagacagata
caggtgattgaccatgatactggctctcttatgaggactatgccattgatggagaagaag
aaattgccaactaaggtgccagaaacaaaaagaacaagaagagatcgtggagagatggaa
gagatcgcgtttaagctctttgaaaggcaaccaaattggactttaagacaattgatccaa
gaaactgatcaacctgaacaatttttgaaagacatcctgaaggacctcgctgtctacaat
aacaaggggcccaatcaaggaacctacgagctgaagccagaatacaggaaatcaactcgg
gaaccaacttctggctag
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