Rhodamnia argentea (silver malletwood): 115750156
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Entry
115750156 CDS
T10595
Name
(RefSeq) bromodomain and WD repeat-containing protein 1-like isoform X1
KO
K11797
PH-interacting protein
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115750156
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115750156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF4
VPS8_N
Bromodomain
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Agenet
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
115750156
NCBI-ProteinID:
XP_030543195
UniProt:
A0A8B8Q7W1
LinkDB
All DBs
Position
1:6358036..6377897
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AA seq
1676 aa
AA seq
DB search
MMDFTKCASSGGALSSSMGPLIFSNKVHELVEIGRPVRAPGHAVETDVDVDLSEIYFLIM
HFLSIGPCQRTFGQLWSELLEHQLLPRRYHAWASRSGIRSGNEDDDGISFPLNYSNLVER
YPHVGKDHLVKLLKQLMRYTGHLVQDKVGIDALSAADVPTLLGVGSFSLLDVDRSKINKQ
LKRLPAYLHWPHMRADQVRGLGLREIGGGFRKHHRAPSIHSACYATAKPLMLVERMQNIK
KLRGHRVAVYCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN
ALVASASNDFVIRVWRLPDGFPISVLRGHTGAVTAIAFNPRPSAVYQLLSSSDDGTCRLW
DARYSQCTPRIYLPKPPDAIAGKSNGPSNNELSSSIAPQSHQILCCAYNANGTVFVTGSS
DTFARVWNACKSNADNPEQPVHEMDVLCGHENDVNYVQFSGCSVAPRSSMSDNLKEENFP
KFRNSWFCHDNIVTCSRDGSAIIWVPRSRKSNGKGGRWVRAYHLKVPPPPLPPQPPRGGP
RQRFLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAGDGSLVHCLTGHSASSYVLDIHP
FNPRIAMSAGYDGKAIVWDIWEGRPIRVYEIGRVKLVDGKFSPDGTSIVLSDDFGQIHLI
NTGEGESQKDAKYDQFFLGDYRPLIRDTVGNVLDQESQLPPHRRNVQDPLCDSSLVPYPE
PYQTMYQQRRLGALGIEWRPPTIRFVVGPDFTLGQEYQMLPLADLERMIEPLPEFIDAVF
WEPENEIVSEDNDSEYNVTEESEGERGSLSAGFSSDPECSAGDSDTKQSHRDSRRRAGRK
KYRTEVEWVTSSGRRVKKRNLEECEGSTSRDTQNKKSKNRRKSSKRQSIKAHNLRPQRVA
ARNALNMICEISDTSTEEENIDNSGDSLSESELLGLNPNKERDNSDRNFPGLQKEGGKVK
EPITKPDELPEYQSNAGNRKRLVLKFSLRDSKKVVPSENTRMIMHNDADLLNVPPPLSQE
MTENMNATTSNDVASRFVNSSNVYEDKEIPENIDDVLIASAGDNENDIRWGEVKMRSSVR
LRSDILLTDASEGTRASWANKENETDLNRGEEKCGADVCEPGELTRTDDHANLEGAHTFS
SADFPPESQPDGNSGAVEEDPPQRSTILRIKTRGPSKLKSTEVEGSTGDESNRNIKHPPH
AEHNQYPEAPEEAPFAERLTSMEPLHLNSNAVVSDTDFDRERPQSSDTDAKNLGYCREEG
FVAFRDPDDIAIDYPEVATDAIRRARSLKMKATSTEPDIIHHSFKVRGHETSGTSKFAET
SSRKARDQLVSKDWVSGSKMMVRPRSSRNKRGESNNNDQGFPWGGKSSQNLRKKSWLTLS
EHEEGYRYIPQLGDEVVYLRQGHQEFIESSCLRGVGPWRSLGGSLSAVEVCKVEALDYAN
SPGSGESCCKLTLKFVNPASNVFGRTFKLMLPELINFPDFLVEKTWYDNSMQRKWSLRDK
CLVWWRNENGTGGSWWEGRIITVQAKSPEFPDSPWERYSVRYRTDPPENHLHSPWELHDL
EVSWDHPHIDPETRDKLLSVFSKLERSVGKNQDYYGYQKLNEAAQKLDFSNRFPVGLDPE
LIQLRLENNYYRRVEAVKHDIMELMRNAQSYFATNAESSVKMRRLSDWFTKTMSGF
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgatggatttcacgaagtgtgcttcttctggtggagcactttcttctagcatgggacct
ttgattttctctaataaggtgcatgaactggttgaaattgggaggccagtgagagctcct
ggtcatgctgttgagactgatgttgatgtagacctcagcgaaatatacttcttgatcatg
cattttctgtcgattggcccatgccaaaggacctttggccaactctggagtgaacttttg
gagcatcagctgcttcctagaaggtatcatgcttgggcttctaggagtggaataagaagt
gggaatgaggatgatgatggcatctctttccctttaaattacagtaatctggtggaaagg
tatccgcacgttgggaaagaccacttggtaaagcttctcaagcaactgatgcggtataca
ggccatttagtgcaagacaaggttggaatagatgcactcagcgctgctgatgttccaacg
ttgctgggagttggttccttttccttgttggatgttgacaggagcaagatcaataagcaa
cttaagcgtctaccagcttacttgcactggccacatatgcgggctgatcaggtccgtggg
cttggtttaagggaaatagggggaggttttagaaagcaccatcgtgccccatcaattcac
tctgcatgttatgctactgcgaagccattgatgttggtcgaaaggatgcaaaatattaag
aagctaaggggacatcgcgttgctgtctattgtgcaatatttgatcgatcaggaagatat
gtcatcacggggtcagatgatcgtcttgtgaagatctggtcaatggaaactgcattttgt
ttggcaagctgccggggacatgaaggtgatattactgatctagctgtaagttcaaacaat
gccctggtggcatctgcttcaaatgacttcgttattcgagtttggcgcttacctgatgga
ttcccaatttcagtcttgcgggggcatactggagctgtcactgctattgcatttaatccc
aggcccagcgctgtatatcagctattatcgtcatcggatgatggaacttgtcgactctgg
gatgctaggtattctcaatgcactccaagaatatacctgccaaaaccaccagatgctatt
gccgggaagagtaacggtccttcaaacaatgaactttcttctagtattgccccgcaaagc
caccaaatactatgctgcgcttacaatgccaatggaactgtatttgtgaccggtagctct
gacacctttgcaagggtctggaatgcttgtaaatccaacgcggataatccagaacaaccg
gttcatgagatggatgtgttatgtgggcatgagaacgatgtcaattatgtccagtttagt
ggttgttctgttgctccccgatcgtcaatgtctgataatttgaaggaggagaattttcca
aagtttagaaattcatggttctgtcatgacaacattgtcacttgttctcgtgatggaagt
gccattatatgggtgccgagatcccgcaaatccaatggaaaaggtggacgttgggtgcga
gcgtatcatttgaaagttccacctccccctttgccgcctcaacctcctcgaggaggtcca
cgtcagagatttcttccgactcctcgtggtgttaatatgattgtgtggagtttggataat
cgctttgttcttgcagctattatggactgtcggatatgtgtgtggaatgctggtgatggt
agtttagttcattgtttgaccggtcacagtgcctcctcctatgtgctagatattcatcca
ttcaatccccggatagctatgagtgctgggtacgatggaaaagcaatcgtttgggatata
tgggaaggcagacctattcgggtgtatgaaattgggcgcgtgaagctggttgatggaaaa
ttttctccggacgggacttcaattgtactttctgatgattttgggcaaatacatctcata
aacactggtgaaggtgaatcccaaaaggatgccaaatatgatcagttcttccttggcgac
taccgcccccttatacgtgacactgttggaaatgttcttgatcaggagtcacaacttcca
ccgcatcgaagaaatgtccaggatcctctttgtgactccagtctggttccatatccagaa
ccctatcaaactatgtaccagcaacgacgacttggtgccttgggtattgagtggcgtcct
cctaccattagatttgttgttggccccgactttactcttggtcaggagtatcagatgctg
cccttagcagatttggaaaggatgattgaacctttacctgagttcattgatgccgttttc
tgggaaccggaaaatgaaattgtcagtgaagataatgactcggagtacaatgttactgag
gaaagtgaaggtgagaggggtagtttaagtgctggattttccagtgatcctgagtgcagt
gcaggagacagtgataccaaacaaagccatagagatagccgccgtagggcaggaaggaaa
aagtatagaactgaggttgaatgggtaacttcgtcgggaaggcgtgtcaagaaaaggaac
ttggaagaatgtgaaggctctacatccagggatactcaaaataaaaaatcaaaaaatcgc
aggaaatcttcaaagaggcagtctatcaaagctcataatttgaggccccagcgtgttgca
gcacggaacgctttgaacatgatttgtgaaatcagtgatacgtctactgaagaagaaaat
attgacaactcaggagactcattgtccgagagtgagttactggggcttaacccaaacaaa
gaaagagacaatagtgacaggaacttccctggtctgcagaaggaaggtggaaaagtcaaa
gaaccaatcaccaaacctgatgaattgcccgagtaccaatcaaatgctggaaacaggaaa
agattggttctgaagttttcgcttcgtgactctaagaaagtcgtgccttcagaaaacact
agaatgataatgcacaatgatgctgatctgctgaatgtacctcctcctctttctcaagaa
atgacagagaacatgaatgctaccacatccaacgatgtggcttctcgctttgtgaattcg
agtaatgtatatgaggataaagaaatacctgaaaatattgatgacgtcctgattgcatct
gctggtgacaacgagaatgacatcagatggggagaggtcaagatgcggtcatcagtgcgt
ctgaggtcagacattttgttgactgatgcatcggaaggaactagggcaagttgggcgaat
aaggaaaatgagactgatctgaataggggtgaggagaagtgtggagctgatgtatgcgaa
cctggggagctcacaagaacagatgaccatgctaatcttgagggtgcacatacattttca
tcagctgactttcccccggagagccaaccagatggaaattcaggtgcagttgaagaggat
cctccacaaagatcaactattttaagaatcaaaacaaggggtccgtccaaactgaaatcc
actgaagtcgaaggttcaactggcgatgaaagcaataggaacataaaacatcctccacat
gcggagcacaatcaataccctgaagctcctgaagaggctccatttgctgaacggttgacc
tccatggagccactgcacttgaattcaaatgcggtggtgtctgatacagacttcgacagg
gaaaggccacagagctctgacacagatgcgaaaaatcttggttactgcagggaggaaggt
ttcgttgccttcagagatcccgatgatattgctattgactaccctgaagttgcgacagat
gcaatacgtagagcaagatccttgaagatgaaggcaacatccacagagccagatatcatc
catcacagtttcaaggttagaggacatgagacttcagggacatcgaagtttgcagagaca
tcctcaagaaaagcacgtgatcagcttgtatctaaagattgggtgtcaggttcaaaaatg
atggtcagaccgaggtctagtaggaataaaaggggcgagagtaataataatgatcaaggt
ttcccttgggggggaaagtcaagccagaatctcaggaaaaagtcatggctgactttgtca
gaacatgaggagggttatcgctatatacctcagttaggcgatgaagttgtttacttgaga
cagggacatcaagagttcatcgaatcgagttgcttgcgaggtgttggcccttggaggtca
cttggagggagtctgagtgctgtggaagtttgcaaggttgaagcccttgattatgccaat
agtccaggctctggggagagctgctgtaaactgactcttaaatttgtgaatcctgcttct
aatgtgtttggacggacattcaagttgatgttgccagagctgatcaattttcctgatttt
ctggttgaaaagacgtggtatgataattctatgcagagaaagtggagccttagggataag
tgccttgtatggtggagaaatgagaatgggacaggaggaagttggtgggagggtcgaata
ataactgtacaagctaagtcacctgagtttcctgacagtccgtgggaaagatattctgtt
cgttacaggactgatcctcctgaaaaccatctgcacagtccttgggaattacatgatctt
gaagtatcctgggatcatcctcatatagatcccgagacccgagataagctcttgtccgtg
ttttccaagctagagcgttcagttggcaagaaccaggactattatggctatcaaaaattg
aatgaagccgctcagaaattggatttttcaaatagatttccagtaggtttggatccagaa
ctgatccagctgaggttggagaacaactattatcggagagtggaagcggtgaagcatgac
ataatggagttgatgcgcaatgctcaatcgtactttgcaacaaacgccgagtcgtctgtc
aagatgaggcgcctgtctgattggtttaccaagacaatgtcgggattttag
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integrated database retrieval system
