KEGG   Rhodamnia argentea (silver malletwood): 115750374
Entry
115750374         CDS       T10595                                 
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03040  Spliceosome
Brite
Messenger RNA biogenesis [BR:rarg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115750374
Spliceosome [BR:rarg03041]
 Complex B
  Other components
   Prp19-related factors
    115750374
 Complex C
    115750374
SSDB
Other DBs
NCBI-GeneID: 115750374
NCBI-ProteinID: XP_048132408
UniProt: A0A8B8Q8T2
LinkDB
Position
3:9497401..9503192
AA seq 922 aa
MSIPKELYPSQDDLLYEEELLRNPFSLKLWWRYLIARSGSPFKKRFIIYERALKALPGSY
KLWHAYLRERLQIVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLLTLTEQKLITR
TRRTFDRALCALPVTQHDRIWEPYLVFVSQRGMPIETPLRVYRRYLKYDPSHIEDFIEFL
VNSSLWQEAAERLASVLNDDQFFSIKGKTKHRLWLELCDLLTKHATEVSGLNVDAIIRGG
IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMKTVITVRDFSVIFDAYAQFEESML
AYKMENMDLSDEDEDEEDGDGEDGVQENGSEEEEDIRLDVNLSVAKFEKKILDGFWLHDD
KDVDLRLARLENLMVRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPSKQILTYTEAVRT
VDPMKAVGKPHTLWVAFAKLYEAHKDIANARVIFDKAVQVNYKAVDHLASIWCEWAEMEL
RHNNFKKALELMRRATAEPSVEVKRRVAADGNEPVQIKLHKSLRLWTFYVDLEESLGTLE
STRAVYERILDLRIATPQIIINYAVLLEDNKYFEDAFKVYERGVKIFKYPHVKDVWVTYL
SKFVRRYGKTKLERSRELFEHAIEMTPSDQVKPLYLQYAKLEEEYGLAKRAMKVYDQATK
AVPSNEKLAMYEIYIARAAEIFGVPRTREIYEQAIENGGLPDKDGKAMCLKYAELEKSLG
EIDRARGIYVYASQFADPRSDVDFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHF
ILPEYVMQKDQKLDLDDARDKLKQAGVSEDEMAALERQLVPSANDVATKEGSRKVGFVSA
GVESQADGGIRSNVNQEDIELPDESDSEEEDRVEIAQKDVPSAVFGGLVRKREDSEKDEE
GKDGESRLGALERIKRLKKASG
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgtcgatacctaaggagctatacccatcgcaagacgacctcctctacgaggaggagctc
ctgcgaaaccccttcagcctgaagctgtggtggcgctacttgattgcgaggtccggctcc
cctttcaagaagcgcttcatcatctacgagcgtgccctaaaggccctccccggcagctac
aagctgtggcacgcgtatctccgcgaacgcctccagattgtccgtaacttgcccatcacg
cactcccagtacgagaccctgaacaacacgttcgagagggcgctggtgacgatgcacaag
atgccccggatttggatcatgtatctgctgacgctcacggagcagaagctgatcacccgc
acgcggaggacgttcgaccgggcgctctgtgcgctcccggtcacgcagcatgatcgtatc
tgggagccgtatctggtgtttgtcagccagaggggcatgccgatcgagactcctctcagg
gtttataggaggtacttgaagtatgacccctctcatattgaggatttcattgagttcttg
gttaattctagtctttggcaagaggcagcggagaggctggcgtcggtgctgaacgacgat
cagtttttctccattaaggggaagaccaagcataggttgtggctcgagttgtgcgatttg
ctcacaaagcatgctacagaggtttctggtcttaatgttgacgcaattataaggggtggg
attaggaagttcactgacgaggtcgggcggttgtggacatcgctcgctgaatactatatc
aggaggaatttacatgagaaggcaagggacatatttgaggagggtatgaagacggtgatt
accgtgagagatttcagtgtgatatttgatgcttatgcgcagtttgaggagagcatgctc
gcgtacaagatggaaaacatggatctgagtgatgaggatgaggatgaggaagacggagat
ggagaggatggggtacaggagaacgggtctgaagaggaggaagatatcaggctggatgtg
aatttgtccgtggccaagtttgagaagaagatccttgatgggttctggttacatgatgat
aaggatgtggatttgcggttagctcgattggagaatttgatggtgcgcaggccagaatta
gcaaatagtgttctcttgcgacaaaatccccataacgtggagcaatggcacaggagggta
aagctgtttgagggtaatccctccaagcagattcttacatacacggaagccgtgaggact
gtagatccgatgaaagctgttggaaagcctcacacgctttgggtagcctttgctaagtta
tatgaggcccacaaagatattgctaatgcgagagtgatatttgacaaagcagtgcaggtc
aactacaaggctgttgatcatttggccagtatttggtgtgagtgggccgagatggaattg
aggcataacaacttcaaaaaggcacttgagttgatgagaagggctactgcggaaccgtca
gttgaggtcaaaagaagagtggctgctgatggaaatgaaccagttcagataaagctgcac
aaatcattgagactgtggacattttatgtggatttggaggagagcctgggtaccttggag
tccacacgtgcagtctatgagcgtattttagatttgagaatagccactccacagataata
atcaattatgcagttctgttggaagataacaagtatttcgaagatgcatttaaggtatat
gaaagaggcgtcaagatatttaagtatccccacgtgaaagatgtatgggtcacttatctc
tctaagttcgtaaggagatatggaaagacgaaactggagcggtcaagagagttgtttgag
cacgctattgaaatgaccccttctgatcaagtaaagcctctataccttcaatacgcgaaa
ttggaagaggagtatggtcttgcgaagagggcaatgaaggtgtatgatcaagccactaag
gccgtgcctagcaatgagaagttggcaatgtacgaaatttacatagcacgagcagcggag
atattcggtgtcccaagaacaagagagatctacgagcaagcgatagaaaatgggggtctt
cctgacaaagatgggaaggcgatgtgcttgaaatatgccgagctcgagaaaagcctgggt
gaaatagatcgtgctcgtggaatttatgtgtatgcatcccaattcgctgacccaagatct
gatgttgatttttggaacaagtggcatgaatttgaggtgcagcacgggaatgaagacacc
ttccgggaaatgcttcgtattaagcgcagtgtttctgcaagctatagccagacacacttc
attctgcccgagtatgtcatgcaaaaagaccagaagctggatcttgatgatgcaagagac
aaattgaaacaggctggtgtttccgaggatgagatggccgctctcgagaggcagcttgtg
ccttcagccaacgacgttgccacgaaagaagggagccgaaaagttggctttgtgagtgct
ggagtagaatctcaggcagatggagggataagaagtaatgtgaaccaagaggacatcgaa
ctgccggatgaaagtgactcggaagaagaggatagagttgaaatcgcgcagaaggacgtg
ccatcggcagttttcggagggttggttcggaagagggaagactccgaaaaggatgaggaa
ggcaaagatggtgagagccgtcttggcgccctggagagaatcaaaagactgaaaaaagca
tccggctga

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