Rhodamnia argentea (silver malletwood): 115750390
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Entry
115750390 CDS
T10595
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03020
RNA polymerase
rarg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115750390
09124 Replication and repair
03420 Nucleotide excision repair
115750390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rarg03021
]
115750390
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115750390
Enzymes [BR:
rarg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115750390
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115750390
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115750390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
115750390
NCBI-ProteinID:
XP_030543566
UniProt:
A0A8B8Q8W1
LinkDB
All DBs
Position
3:complement(10020664..10029287)
Genome browser
AA seq
1195 aa
AA seq
DB search
MEDDQEHDPAYIEEDEDEDDAEITQEDAWAVISAYFEDKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQPDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVSMRVIKKGHDGEELTEPQDLQKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV
EEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAAYPILEFLEEWGTENFEEISPVVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRV
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQKLLIKKKDIHALQQREGGPDDVGW
HDLVAKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCAS
IIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHF
RQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDF
GRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQASRYSRRD
HSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQ
EDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS
KALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTR
QPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK
NSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDIKPAKDQKKKGA
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaccaggagcacgatccggcgtacatcgaggaggacgaggacgaggacgac
gccgagatcacgcaggaggacgcctgggccgtcatctcggcctacttcgaggacaagggg
ctggtgcggcagcagctcgactccttcgacgagttcatccagaacacgatgcaggaaatc
gtcgacgagtcagcggacatcgagattcggcccgagtcgcagcacaatcctgggcaccag
cccgatttcgccgagaccatatataaaatcaactttggtcaaatatacttgagtaagccg
atgatgaccgagtcagatggagaaacggcaaccttgtttcccaaagctgcaagattgaga
aatctgacatactcagctcccttgtatgttgatgtttctatgagagttattaagaaggga
catgatggtgaagaactcactgaacctcaggacttgcaaaaagtttttattgggaaggtc
cctataatgcttcgatcaagctattgcacattataccagaattcagagaaggatttgacc
gaacttggagagtgtccttatgaccaagggggttattttatcataaatggaagtgaaaag
gttttaattgcccaggagaagatgagcaccaaccatgtgtatgtgttcaagaagaggcag
ccaaataagtatgcctatgtggcagaagttcggtcaatggccgaatctcaaaataggccg
cccagcacaatgtttgtccggatgctttctcgcacaagtgccaaggggggatcttcaggg
caatatattcgggcaactcttccgtatattcggacagagatccctataataattgtgttt
cgagctctcggttttgttgctgataaggacatactggagcatatatgttacgacttttct
gatactcaaatgatggagttgcttcgtccttctcttgaggaagcatttgtaatacaaaat
caacaggttgctctggactacattggtaagcgaggagcaacagttggtgtgactcgagaa
aaacgtataaagtatgctaaagagatccttcagaaagaaatgcttccacatgttggtgtt
gaagagtattgtgagacaaaaaaagcttattactttggatacatcatccatcggcttctt
ttatgtgctcttggtcgaagggcagaggatgaccgtgatcactatggcaacaagaggcta
gatctcgctggacccttacttggaggcttgttcagaatgctttttagaaaattgacgagg
gatgttagaggctatgtgcagaagtgtgttgacaatggaaaggatgtcaacctccaattt
gcaataaaagcgaagaccataactagtggtcttaagtattcgcttgccacagggaactgg
ggacaagccaatgctgcgggaacgagagctggagtgtcacaggtgctgaatcggttaaca
tatgcttcaactttgtcacatttaagaagattaaattcaccaatagggcgtgaaggtaaa
ttggcgaagccacggcagctgcacaattctcaatggggaatgatgtgtcctgctgagact
cctgagggacaagcttgcggactggtaaagaatcttgctttgatggtatatattacggtc
ggttcagcggcatatcccatattggaatttttggaagaatggggcacagagaattttgag
gaaatttctcctgtggtcatccctcaagcgacaaaaatttttgttaatggttgctgggtt
ggcatccatcgcgaccctgatatgttggtgaaaactttacgacggttaaggagacgggtt
gatgtcaatactgaagttggggtcgtcagagatatcagattgaaggaactgaggatatac
actgattatggacggtgtagtcgtccattgtttatagttgagaaacaaaaacttctaata
aagaagaaggatatacatgcattgcagcagagagaagggggcccggacgatgtggggtgg
cacgatttagtggcaaagggattcatagagtatattgatactgaggaggaagaaactact
atgatttccatgaccattaatgaccttgtgcaagcacggcttaaccctgaggaggcatat
tctgaaacttacacgcactgtgaaatccatccatcattgatcctaggtgtttgtgcttca
atcataccgttccctgaccataaccagtctccacgtaatacgtatcaatcagcaatggga
aagcaagccatgggaatttacgtcaccaactaccaatttcggatggatacattggcatat
gtgctatactatcctcaaaagcctcttgttactacacgagctatggagcaccttcacttc
aggcagcttcctgctggcattaatgccattgttgccattgcttgctattctgggtacaat
caagaagattccgtcattatgaaccagtcatcaatagatcgtggatttttccgatctctg
tttttccgttcatacagggatgaggagaaaaagatggggactctggtcaaagaggacttt
ggtcgtcctgacagagccaatacaatgggcatgaggcatggttcctatgataaattggat
gatgatggccttgcacctcctggaacaagggtttcaggtgaagatgtcattattggaaaa
accactccaattgcacaggatgatgctcagggacaagcttcacgttattcgaggcgtgat
cacagcattagtttacggcacagtgagactgggatagttgatcaggttctgctgacgaca
aatgctgatgggttgagatttgtcaaagtaagagtgagatctgttcgaatacctcaaatt
ggggataaatttagcagtagacacgggcaaaaaggaacagtaggcatgacatacacgcaa
gaagacatgccttggactgtggaaggcattacacctgatataatcgtgaacccacatgct
attccctctcgcatgacaattgggcagctcattgagtgtattatgggcaaggttgctgct
cacatgggaaaggaaggagatgctactcctttcacagatgtgactgtggataacatcagc
aaagctctacacaaatgtgggtatcagatgcgaggattcgagacaatgtacaatggtcac
actggccggcggctcactgctatgattttcctgggtccaacatattatcagagactcaag
cacatggtggatgataagatccattcccgtggtcggggtcctgtgcaaattcttacaagg
cagcctgccgagggacggtctcgagatggtggtctccgttttggagagatggaaagagat
tgcatgattgctcatggagccgctcattttctcaaagagaggttgttcgaccaaagcgat
gcatatagagtccacgtgtgtgaacgctgtggattgattgccatcgcaaacctgaagaag
aattctttcgagtgcagaggttgcaaaaacaaaaccgacattgttcaggttcacattcct
tatgcttgtaaattgctcttccaagagcttatggccatggccatagcaccgaggatgctc
accaaggatatcaaaccagcaaaagaccagaagaaaaagggtgcctga
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