Rhodamnia argentea (silver malletwood): 115750840
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Entry
115750840 CDS
T10595
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115750840
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115750840
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115750840
NCBI-ProteinID:
XP_030544293
UniProt:
A0A8B8QCM2
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Position
5:4305184..4312076
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AA seq
497 aa
AA seq
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MRMLFPTTCILPACIFFVSLSLSAAMNLTLPHQHPDPEAVVQDVHRRLNASLSRRLLSSS
SSSCGTGNPIDDCWRCDPNWASNRQRLADCGIGFGQSALGGRDGRIYVVTDSSDLDVVNP
KPGTLRFGAIQDEPLWIIFSADMLIRLKHELILNSFKTIDGRGHNIQITGNGCLTVQYIS
NIIIHNVHIHHCKPSGNTNIRSSPTHVGWRGRSDGDGISIFGASHIWVDHCSLSYCADGL
IDAIMGSTAITISNSYFSHHDEVMLLGHDDKYAPDTGMQVTIAFNHFGEALVQRMPRCRR
GYIHVVNNDFTAWEMYAIGGSANPTINSQGNRYTAPVDPNAKEVTKRVDTEENEWTDWNW
RTEGDVMVNGAFFVPSGVGLSAQYSKASSIEPKSAGLINQLTMNAGVFGDPRDNSAGISY
PGFAGGGTSTGSSTDGAVGAGGGSDGGEGDYFGMIFGSDAPPAHSSATSILLFLLIILVL
YTSTNRGALLSLQLLTL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgttgttcccgaccacctgcattctccctgcgtgcatcttcttcgtctctctc
tccctctcggctgctatgaacctcaccctccctcaccaacacccggaccctgaagctgtt
gtccaagatgtgcacaggagactgaatgcctccctctcaagaagactcctgtcctcgtcc
tcctcgtcgtgtggcaccggcaaccccatcgacgactgctggcggtgtgacccgaactgg
gcctcgaaccggcagcgcctggcagactgtggcattgggtttgggcagtcggcgctgggt
ggtcgtgacgggcgcatctacgtggtgaccgactcctcggacttggatgtggtgaacccg
aaaccggggacgctccggttcggggccatccaggacgagcccctgtggatcatcttctcc
gccgacatgttgatccggctcaagcacgagctcatcctcaacagcttcaagaccatcgat
ggccgggggcacaacatccaaatcacaggcaacggctgcctcaccgtccaatacatctcc
aacatcatcatccacaacgtccacatccaccactgcaagccctccggcaacaccaacatc
cgatcgtcgccgacccacgtcgggtggcgcgggcgatccgacggggacgggatatcgata
ttcggggcgtcgcacatatgggtggaccactgctcgctgtcgtactgcgcggacgggctg
attgacgcaatcatgggctcgacggcaatcacgatatcgaacagctacttctcgcaccac
gacgaggtgatgctgctggggcacgacgacaagtacgccccggacacggggatgcaggtg
acaatcgcgttcaaccacttcggggaggcgctggtgcagcggatgccgcggtgccggcgg
ggctacatccacgtagtcaacaacgacttcacggcgtgggagatgtacgccatcggcggc
agcgccaaccccactatcaacagccagggcaaccgctacacggcgcccgtcgaccccaac
gccaaggaggtgacaaagcgcgtggacacagaggagaacgagtggacggactggaactgg
aggacggagggggacgtcatggtgaacggcgccttcttcgtgccgtccggggtcggcctc
agcgctcagtactccaaggcctccagcattgagcccaagtctgctggcctcatcaaccag
ttgaccatgaacgctggcgtcttcggcgatcctagggacaacagcgccggcatatcttac
ccggggtttgctgggggcgggaccagcacgggctcctccaccgacggtgccgtcggtgca
ggaggtgggtctgacggaggggaaggtgactactttggaatgatattcgggagcgatgcg
ccaccagcacattcatcagctacctcaatccttttgtttttactaatcattttggttttg
tacactagtaccaaccgtggtgctctattatcattgcaattgttgacattgtag
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