KEGG   Rhodamnia argentea (silver malletwood): 115750955
Entry
115750955         CDS       T10595                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115750955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rarg03019]
    115750955
   03041 Spliceosome [BR:rarg03041]
    115750955
   03032 DNA replication proteins [BR:rarg03032]
    115750955
Messenger RNA biogenesis [BR:rarg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     115750955
Spliceosome [BR:rarg03041]
 Complex A
  U1 snRNP components
   Sm proteins
    115750955
  U2 snRNP components
    115750955
 Complex B
  U1 snRNP components
    115750955
  U4/U6.U5 tri-snRNP components
    115750955
 Complex C
  U2 snRNP components
    115750955
DNA replication proteins [BR:rarg03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     115750955
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 115750955
NCBI-ProteinID: XP_030544443
UniProt: A0A8B8QD31
LinkDB
Position
4:17215308..17219527
AA seq 132 aa
MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMLECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLESRIKGKSSALGVGRGRAVAMRARAQAAGRGA
APGRGVVPPVRR
NT seq 399 nt   +upstreamnt  +downstreamnt
atgagcaggagcttggggatcccggtgaagctgctccacgaagcctcgggccacatcgtc
accgtcgagcttaagagcggcgagctctaccgggggagcatgctcgagtgcgaggacaac
tggaattgccagctcgagaacatcacttacaccgctaaggatggaaaagtctcacagctt
gagcatgtatttattcgagggagcaaagtcaggttcatggtaataccagacatgctgaag
aacgctccaatgttcaagcgcctggagtccaggatcaagggtaaaagctcagcattggga
gttggcaggggacgagctgttgcgatgcgagctagagctcaagctgctggaagaggagca
gcaccgggtagaggcgttgttccacctgttcgaaggtaa

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