Rhodamnia argentea (silver malletwood): 115750982
Help
Entry
115750982 CDS
T10595
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115750982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115750982
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115750982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
MMR_HSR1
GTP_EFTU_D4
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
115750982
NCBI-ProteinID:
XP_048133785
LinkDB
All DBs
Position
4:complement(17655741..17662112)
Genome browser
AA seq
764 aa
AA seq
DB search
MPRKVNYGLDYDDDYDDDNDYDDYDIDYDVEDNAFSVVTGNLHKPNQEATRSGIWRCSIC
TYDNDQSMTACDICGVLRNPLPSSGISNGNDLKTVCKDSGASKMARSLFESLPNQTPKRD
ALIQQQNDDPLTGQRTILHGSADVHGNFNKLHEAFNTHAHRTVNIAPFKFDVPSPDDIVT
NGLRSSKMGPKASANVKKNNMSAPMSTRSSNSSSLTMPKGRNVAGNENNQLKDGERNLRS
SAKSPDEMAGTSSSYHEGGVEYTLPMDEIKPRSLAYSLDSASINDRGGYSNSYGTGKAAS
QGQYKPEKWMLHEAEDGLLSQLNLAIVGHVDSGKSTLSGRLLHLLGQISQKDMHKHEKEA
KLQGKGSFAYAWALDESPEERERGITMTVAVAYFDTKRYRVVVLDSPGHKDFVPNMISGA
TQADAALLVIDASNGSFEAGMDGSKGQTKEHAQLIRSFGVDQLIVAVNKMDVVQYSKDRF
DLIKQQLGTFLRSSGFRDSSVLWIPLSAMENQNLVTAPSDIRLLSWYKGPYLLDAIDSLQ
PPTRNVSKPLVMPICDVIKSPSMGQVSACGKLEAGALRSGVKVLVMPSGDVGTVRSLERD
TRPCAIARAGDNVAVVLQGIDTSHVISGGVLCHPDFPITIAKHLELKVLVLDGASPILIG
SQLEFHIHHAKEVARVEKMVSLFDPKTGKVMKKAPRCLLAKQSAVIEVVLQGPVCAEEFS
SCKALGRVSLRALGRTLAVGIVTRVIEKEPIAFFKSKYFVFFSK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaaggttaattatggccttgattatgatgacgactacgacgacgacaacgac
tacgatgactatgatattgattatgatgtagaagataatgctttttctgttgtaacaggc
aatttgcataagccaaatcaagaggccacccggtctggcatttggcgttgctccatttgt
acctacgataatgaccagagcatgactgcgtgtgatatttgtggggttcttcgaaatcct
ttgccttcgagtggtatcagcaatggcaatgacctgaaaacagtgtgtaaagattctgga
gcatccaaaatggccaggtctctttttgaatcattgcccaatcagacacctaaaagggat
gcattaattcaacagcaaaatgatgatcccttgacaggacagcgcaccatcttacatggg
tctgctgatgtgcatgggaacttcaataagcttcatgaggcatttaacactcatgcccat
agaactgtcaatatagcgcctttcaaattcgatgtcccgtcccctgatgatattgtcact
aatggattgcgctcctccaaaatgggtccaaaagcaagtgcaaacgtaaagaagaataac
atgtctgctccaatgagcacaagatcatcaaacagctcatctcttacgatgccaaagggc
agaaatgtcgctggtaatgaaaacaatcaattaaaagatggagagcgcaatctaagatca
agtgcaaaaagtccagatgaaatggcaggcacctcgtcaagctatcatgagggtggggtt
gagtacactttaccaatggatgagatcaagccgcgaagtcttgcgtatagtttagacagt
gcctctattaatgatagaggtggatattccaatagttatggcactggaaaagctgcttct
cagggacagtataaacctgaaaaatggatgctccatgaagcagaagatggcttattgagt
caactgaatcttgctattgtggggcatgttgattctgggaaatcaacactttcaggtaga
cttcttcatcttttgggacaaatatctcaaaaggacatgcacaagcatgaaaaagaggcc
aaactacagggcaagggatcctttgcttatgcctgggcattggatgagagcccagaggaa
agggaaaggggaataaccatgacggtggctgttgcttattttgataccaaaaggtatcgc
gttgttgtgctggactccccagggcacaaggattttgttccaaacatgatatcaggagcc
acacaagctgatgctgcattgctcgtcattgatgcatccaatggttcttttgaagctggc
atggatggtagtaagggccaaactaaagagcatgcacagcttatcagaagctttggagta
gatcaacttattgttgccgttaacaaaatggatgtcgtgcagtactcgaaggatagattc
gatttgatcaaacagcagcttgggacattcctccggtctagtggttttagagactcgtca
gtattatggattcctctgagtgccatggagaatcaaaatctggtcacagctccttcagac
attcggttattatcctggtataagggaccatacttgttggatgctattgactccctccaa
cctccaaccaggaatgtttcgaaacctctagtcatgcccatatgtgacgttattaaatca
ccttcgatggggcaggtctctgcttgtggtaaattggaagctggagctcttcgaagtgga
gtgaaggttctggtcatgccatcaggggatgtggggacagtcaggtctttggaacgtgac
actcgcccatgtgcaattgcgagagctggggataatgttgcagtggttcttcagggaatt
gatacaagccacgtgatatctggcggggtcctttgtcaccccgatttccccataaccatt
gcaaagcatctggagctgaaagtgcttgtcttggatggtgcttcccccattctaattggt
tctcagttggaatttcatattcaccatgcaaaggaagttgccagagttgaaaaaatggtg
tcattgttcgatcctaagactggcaaggtgatgaagaaagcaccgcggtgtctcctcgca
aagcagagtgcagttattgaggtggttttgcaaggaccagtttgtgcagaagagttttca
agctgtaaagctcttggtagggtctccttaagagcattggggagaactctagctgtaggg
attgttactcgagtaattgagaaagagccaatagcatttttcaaaagtaaatattttgta
ttcttcagcaaatga
DBGET
integrated database retrieval system
