Rhodamnia argentea (silver malletwood): 115751074
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Entry
115751074 CDS
T10595
Name
(RefSeq) transcription elongation factor SPT4 homolog 2 isoform X1
KO
K15171
transcription elongation factor SPT4
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115751074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rarg03021
]
115751074
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115751074
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115751074
RNA polymerase I system
115751074
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
115751074
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
115751074
NCBI-ProteinID:
XP_030544646
UniProt:
A0A8B8QBX4
LinkDB
All DBs
Position
5:complement(5229845..5233717)
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AA seq
118 aa
AA seq
DB search
MGSAAPPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKMDEDHERIVECTTPN
FNGIISVMDPSRSWAARWLRIGKFVPGVYTLAVSEALPEDLQNLCEDERVQYVPPKRV
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgccgcgccacccgctcagatcccgacgagcttcggccacgagctcagagcc
tgccttcgttgccgtctcgtcaagacctacgatcagttcagagactcgggctgcgagaac
tgccccttcttcaagatggacgaagaccacgagcgcatcgtcgagtgcaccactcccaat
ttcaacgggataatctctgtcatggatcctagcaggagctgggctgctcggtggctaaga
attggaaaatttgttcctggtgtctacacacttgcagtctcagaagcactacctgaggac
ctgcagaacttatgtgaagacgaacgtgtgcagtatgtgcctccaaaacgcgtatga
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