Rhodamnia argentea (silver malletwood): 115751387
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Entry
115751387 CDS
T10595
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03030
DNA replication
rarg03410
Base excision repair
rarg03420
Nucleotide excision repair
rarg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115751387
03410 Base excision repair
115751387
03420 Nucleotide excision repair
115751387
03430 Mismatch repair
115751387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rarg03032
]
115751387
03036 Chromosome and associated proteins [BR:
rarg03036
]
115751387
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115751387
DNA replication proteins [BR:
rarg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115751387
DNA Replication Termination Factors
ELG1-RFC complex
115751387
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115751387
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115751387
Check point factors
HRAD17(Rad24)-RFC complex
115751387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
PhoH
AAA_16
AAA_11
AAA_5
AAA_14
nSTAND3
AAA_24
AAA_assoc_2
AAA_2
SLFN-g3_helicase
ResIII
AAA_19
AAA_28
AAA_7
AAA_30
AAA_25
DNAX_ATPase_lid
Ribophorin_II
RNA_helicase
T2SSE
Parvo_NS1
AAA_18
DUF815
NPHP3_N
bpMoxR
DUF3853
IstB_IS21
TIP49
NB-ARC
CPG4
Motif
Other DBs
NCBI-GeneID:
115751387
NCBI-ProteinID:
XP_030545142
UniProt:
A0A8B8QFZ4
LinkDB
All DBs
Position
2:complement(22000991..22006492)
Genome browser
AA seq
342 aa
AA seq
DB search
MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGGYPCPPYKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMT
SRILHICKEEGLNLDAEALSTLSTISQGDLRRAITYLQGAARLFGSSITSKDLISVSGVI
PQEVVGALLAACKSGNFDLANKEVNNAIAEGYPVSQMLSQLFEVVVEADDISDEQKARIC
KRLGEADKCLVDGADEYLQLLDVASNTMRALCNMPQEFSYET
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaattttgcagagctcacaaccttgggtcgagaaatatcgaccgaaacaagtg
aaggatgtggctcaccaggacgaggtggttcgggtcctcaccaacactctcgaaaccgct
aattgcccgcacatgctcttttatggcccgccgggcaccggtaagacgaccactgcgctg
gccattgctcaccagctttttgggcctgagctctacaaatctagagtgctcgagctcaat
gcgagcgatgatcgtggaattaacgttgttagaactaaaataaaagattttgcagctgtg
gctgtgggatctggtcaacgtcaagggggctatccctgtccaccatacaaaataatcatc
ctggacgaggcagattcaatgacagaggatgctcagaatgctctgaggcgtacaatggag
acatactctaaagtcacaagattcttttttatatgcaactacatcagcagaatcatagag
ccacttgcttccagatgtgcaaagtttcggttcaagccgctttcagaagaaataatgact
agccgtatattgcacatatgcaaggaagaaggtctcaatctggatgccgaggctttgtca
accttaagtacaatctctcaaggtgatttgcgtagggctatcacatacttacagggagct
gctcgattatttggatcatcaattacttcaaaggatctaataagtgtttctggggtaatc
ccacaggaggttgttggggcacttcttgcagcatgtaagagtggcaactttgacttggca
aacaaggaggtcaataatgccatcgcagagggatatccagtctcccagatgctttctcag
ttatttgaggtggttgtcgaagcagacgatatttcagacgaacagaaggctaggatatgc
aaaagattgggtgaagctgataagtgtcttgttgacggcgcggatgagtacttgcagctt
ttggatgtggctagcaacaccatgcgagctctgtgtaacatgccccaagaattctcttat
gagacttga
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