Rhodamnia argentea (silver malletwood): 115751461
Help
Entry
115751461 CDS
T10595
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03030
DNA replication
rarg03410
Base excision repair
rarg03420
Nucleotide excision repair
rarg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115751461
03410 Base excision repair
115751461
03420 Nucleotide excision repair
115751461
03430 Mismatch repair
115751461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rarg03032
]
115751461
03036 Chromosome and associated proteins [BR:
rarg03036
]
115751461
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115751461
DNA replication proteins [BR:
rarg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115751461
DNA Replication Termination Factors
ELG1-RFC complex
115751461
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115751461
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115751461
Check point factors
HRAD17(Rad24)-RFC complex
115751461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_assoc_2
AAA_22
AAA_16
AAA_11
nSTAND_NTPase5
ATPase_2
AAA_5
AAA_14
AAA_30
DNAX_ATPase_lid
AAA_7
DUF815
RuvB_N
AAA_24
ResIII
bpMoxR
AAA_19
nSTAND3
AAA_3
TniB
SLFN-g3_helicase
AAA_28
AAA_2
TIP49
Mg_chelatase
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
115751461
NCBI-ProteinID:
XP_030545240
UniProt:
A0A8B8QDP4
LinkDB
All DBs
Position
2:21872421..21878158
Genome browser
AA seq
367 aa
AA seq
DB search
MTTEVVSLMDIDGDEENNNHDHPPKSDKGKSVVVSGTSPDGKATPWVEKYRPQSLADVAA
HRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRG
IDVVRQQIQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKHTRFALI
CNHVNKIIPALQSRCTRFRFAPLDRIYVADRLKHVIAAEGLDVTESGLEALVRLSNGDMR
KALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFATSLRRISDIKTRKG
LAVLDIVREVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSVIASFTHARA
ALVAAVK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggaggtggtctctctcatggacatcgacggcgacgaagaaaacaacaaccac
gaccaccctccgaagtcggacaagggcaaaagcgtcgtcgtctccggcacttcaccggat
ggcaaggccacgccgtgggtcgagaagtaccgacctcagtcgctcgccgatgtcgccgct
catcgcgacattgtggacaccattgataggttgacgagtgagaacaggttgccacatcta
ttgctgtatggccctcctggcacgggcaaaacctcgaccatactggcagtggctcgcaag
ctttatggagcacagtatcacaatatgatcttggagttgaatgcatctgatgacagaggc
atcgatgttgtgcggcagcagattcaagactttgctagcactcagagcttctcatttggt
gctaagtcctctgtgaagttggtgctgctggacgaggctgatgccatgacaaaggatgcc
caatttgcactgcgcagagtgattgagaaatacacaaagcacactaggtttgctctgatc
tgtaatcatgtcaacaagatcattccagctttacaatctagatgtaccagattcagattt
gctcctctcgatcgcatctatgttgcagatcgacttaaacatgtcatagcagctgagggg
cttgatgtaactgagagtggcttggaggcacttgtacgactcagcaacggtgacatgaga
aaggctttgaacatcctgcagtcgacgcatatggcttctcaacaaataacagaggaagct
gtctacctctgtactggaaatccactgcccaaagacattgagcaaatatcttattggctt
ctaaatgaatcttttgctacgagtttgagacgaatatctgatattaagacaaggaaaggt
ttggccgtgttggacatcgttagggaagtgacaatgtttgtatttaaaatcaagatgcca
tcagatgttcgtgtccagttgattaatgatttagcagacattgagtacaggttgagcttc
ggatgcaacgataaattgcagctgggatcggtcattgcctctttcacgcacgctcgtgct
gcgctggttgctgccgtgaagtag
DBGET
integrated database retrieval system
