Rhodamnia argentea (silver malletwood): 115751809
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Entry
115751809 CDS
T10595
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115751809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rarg03041
]
115751809
Spliceosome [BR:
rarg03041
]
Common components
Common spliceosomal components
SR proteins
115751809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
115751809
NCBI-ProteinID:
XP_030545679
UniProt:
A0A8B8QES8
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Position
5:3554908..3558808
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AA seq
316 aa
AA seq
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MPRYDDRRSNTRLYVGHLSSRTKTRDLEDLFARYGRIRAVDMKRDYAFVEFSDPRDADDA
RYSLDGRDFKGSRIIVEFSKGINHSHPSVGLAETPRAPGGSRDYMGRGPPPGSGRCFNCG
IDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRKLRREDYSRSPSPRRGRSRSRSYS
RSRSYSRSISPVKRERSFDDVERRPRSPIGSRSPKRGRSPPSRGRDYSPVADERSPLRDK
ADQSPEDKKYANGSDYSNSPRRKSRSPVNDAEADGARNYRSPAEENGRSRSPSPMPRDEE
GLAGDDDNRDSPRGSE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgctatgatgaccgtcgcagcaacacgcgactttatgttggtcacctgtcttcg
cgaacaaagacacgtgacttggaggatctgtttgctagatatggaagaattcgtgctgtg
gatatgaagcgagactacgcctttgttgagttcagtgatcctcgggacgctgatgatgca
agatatagcttggatggcagagattttaaaggaagccgtattatcgtggaattttcgaag
gggattaatcactcccatccctcggttggacttgctgagacaccacgtgctcctggagga
tctcgtgattacatgggtaggggtcctcctcctggttctggacgctgttttaattgcggg
attgatggccattgggctcgagattgcaaagctggggactggaagaataaatgctatcga
tgtggggaaaggggccatatagaaagaaattgtcagaacagtccaaggaaattaagacgt
gaggattactctcggtctcctagtcctcgacgtggtcggagtaggagccggagttacagt
cgtagtcgtagttacagtaggtcaatctccccggtaaagagggagcggagttttgatgat
gttgaaagaaggccaaggagccctattggtagtcgaagccctaagcggggaaggagccca
ccatctagaggaagagattacagcccagttgctgacgagagaagccccctgagagacaaa
gctgaccaatcccctgaagataagaaatatgccaatgggtcggattatagcaacagcccc
aggaggaagagcaggagccctgtcaatgatgctgaagctgatggtgcgagaaactacaga
agccctgccgaggaaaatggccgcagtcggagccccagcccgatgcctagggatgaagag
ggccttgctggagatgatgataatcgcgattctccaagaggcagtgagtga
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