Rhodamnia argentea (silver malletwood): 115752686
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Entry
115752686 CDS
T10595
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115752686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115752686
03036 Chromosome and associated proteins [BR:
rarg03036
]
115752686
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115752686
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115752686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
115752686
NCBI-ProteinID:
XP_030546838
UniProt:
A0A8B8QJY9
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Position
2:complement(24840675..24847802)
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AA seq
1065 aa
AA seq
DB search
MASTSLLTSPDELCFTRHGFSTASTCGVYSDAGPSDSDFSIKLKKRRISCCPSSLSNRLL
SGREIPLPIVEFSDYFIEPCLEELATREFEDPGYLSRVQNFTVGRFGYGFVKFLGETDVR
GLDINELVKFGRHELVVYGDESLKPSVGQGLNKAAEVTLVLQIGSFDEGLLDDMVTRLRR
STERQGASFISFNSTYREWKFSVQHFSRFGLSEDDEEDSIMDDAPAVQDPATENVGEISD
VDEEPRVNPVGPDLSHSLPAHLGLDPAKMNEMRMLMFPNDEEELEHINEIPPSGKSSLSK
DYARSSFQSSTQRMTPKVTPPVARRTPLPLLEYRPHTADSSSPGAILLTQQNRDMSLKAT
GVEGFKLDITCETPLTGHYSRNIVDAGLFMGRSFRVGWGPNGVLVHSGTSVGSKDSQRVL
SSVINIEKVAIDKAVRDEDNKVRKELVELAFNSALNLHEALNHKTKEVEVGSFKLKLQNL
VCDRLTLSGVCRSYIDIVERQLEVSGLSPSAKVILMHQVMVWELIKVLFSERENNGQSKS
VGADNEEDVMEDIKDGSPDVDPEALPLIRRAEFSYWLQECVCHRVQAEISSISESSYLEH
LFLLLTGRQRDAAVELAASKGDVRLACLISQAGGSPLNRSDISRQLDLWRTNGLDFSFIE
KDRVRILELLAGNIGGALRDIGIDWKRFLGLLMWYQLPPDSSLPIVFQTYKQLLNNGRAP
YPVPVYIDEGVAGESVTQTNEERFDFSYYLMLLHCNQDREFGLLKRMFSTLSSTNDPLDY
HMIWHQRALLQAVGAFSANDLFVLDMGLVSQLLSLNQCHWAIYVVLHLPYKEDYPYLQAT
VIREILFQYCEIWSSEKSQQQYIEKLGVPLAWLHEAMAVYFNYHGDFLKSLEHFLQCSNW
PRAHSIFVTSVAHSLFLSAKNSEIWRLASLMEEHKSEIENWDLGAGIYISFYSIKSALLE
DDDSMNGLDSLESKNAACKNFLDQLNESLVVWAGRLPLEARVAYSKMAEEISSLLLSDIS
EDPTRDLQLSCFRNVCSAPVPEDLRASHLQDAVALYTCYLSELAS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacctctctccttacttctcccgatgaactgtgctttactagacatggcttc
tccactgcttcaacctgtggggtatacagtgatgcgggcccatcggactctgatttttcc
ataaaattaaagaaaaggaggatatcttgttgtccaagttctttgtcaaatcggcttttg
agcgggagagaaattcctttgcctattgtagagttttctgattattttatagaaccttgc
ctggaagaactagccactcgggaatttgaagatcctggctacttgagtcgagtccagaat
tttacagtagggaggttcggttatgggtttgttaagttcttaggagagacagatgttaga
ggtttggatataaatgaacttgtgaagtttggaaggcatgaactagttgtatatggagat
gaaagcttgaagccttcagttggccaaggactcaacaaagctgctgaggttaccttggtt
ctacaaattggatcatttgatgagggcctactggacgatatggtcacaagattaagacgc
agcacagaaagacaaggagccagcttcatttcgtttaattctacatatcgtgaatggaaa
ttctcagttcaacattttagtagatttggtcttagtgaagatgatgaagaagatagcatt
atggatgatgccccagcagttcaagatcccgcaacagaaaatgttggggagatttctgat
gttgatgaagaacctcgagttaatccagttgggcctgacctttctcattctcttcctgcc
catcttggtcttgacccggcaaagatgaatgaaatgagaatgttgatgtttcctaatgat
gaagaggagctcgagcacatcaatgagatacctccgtctggaaagtcatccttaagcaaa
gattatgcaagatcgtcctttcagagctctacccagaggatgaccccaaaagtgactcct
cctgtcgcgcggaggacaccattacctttactcgagtacagacctcatacagctgactct
agctctccaggagccattcttttgacgcaacaaaatagggatatgtcattgaaggcaaca
ggagtggaagggtttaaactggacataacatgtgagacccctttaactggacactattcg
aggaatatcgttgatgctggcctttttatgggtaggtcattccgagttggttggggtcca
aatggtgtccttgtccactcaggtacatctgtaggtagcaaggactcacagagggttttg
tcttctgttattaacatagaaaaggttgcaattgataaagcagttagagatgaggacaac
aaagtcaggaaggagttagttgagttggctttcaattccgcactgaatttgcatgaggca
ttaaatcacaaaacaaaagaagttgaggttgggtctttcaaactgaagcttcaaaacttg
gtttgcgaccgcttaacactttcaggagtttgccgaagctacatagatattgttgagaga
cagttggaggtttctgggttgtctccttctgccaaagtgattttgatgcaccaagtgatg
gtctgggaattgattaaagttcttttttctgaaagagagaataatgggcagtcaaaatca
gtaggtgctgacaatgaggaagatgtgatggaggatatcaaagatggttcacctgacgtc
gaccctgaagcacttcctcttattcgaagagcagagttcagttactggttgcaagagtgt
gtttgccaccgtgtacaggcagaaataagctcaataagtgagtcgagttatctagagcat
ctgttcttacttttgactggccgacagcgggatgctgctgtggagctggccgcttctaaa
ggagatgtaaggttggcttgtttaatcagccaagcaggtggttccccactaaaccgttct
gacatctctagacagcttgatctttggagaaccaatggattggacttcagttttattgag
aaagatagagtaagaattttggaattgcttgctggcaacattggtggtgctctgcgtgat
attggaatagactggaagagatttttggggttgttgatgtggtaccaactgccacctgac
tcttcattgcccattgtatttcaaacttacaagcaactcctcaataatgggagagctcct
tatcctgttcccgtgtacattgatgaaggagtggcaggagagtcagtgactcagactaat
gaggaacggttcgacttctcatattatcttatgcttctacattgtaatcaagatcgtgaa
ttcggcttgctgaagagaatgtttagcacgttatcttcgacaaatgatccacttgactac
catatgatctggcatcagcgtgctttacttcaagcagttggagctttcagtgcaaatgat
ctttttgttcttgacatgggacttgtttcacaattgctctctctgaaccaatgtcactgg
gccatctatgtagtccttcacttgccttataaagaggactatccatatctacaggctact
gtaatacgtgaaattttgtttcaatactgtgaaatatggagttcggaaaagtcgcaacag
caatatattgaaaagttgggtgtcccattggcttggttgcatgaggcaatggcagtctat
ttcaactaccatggagacttcttaaaatctttggagcactttcttcagtgttcgaattgg
ccaagggctcactctatctttgtgacttcagttgcacattcgttgttcttatcagcaaag
aattcagaaatatggaggttggcatctttgatggaggaacacaagtcagaaattgaaaac
tgggacttaggcgcggggatttacatatcattttattcgataaaaagtgctttgctggaa
gatgatgatagtatgaatggattggactcccttgagagcaaaaatgctgcctgtaagaac
ttccttgatcaattaaatgagtcattggtggtttgggccggcagattacctctagaagct
agagttgcatactcgaagatggccgaggagatctctagtctgcttttatcagacatatcc
gaggatccaacgagggatcttcagttaagctgcttcagaaatgtatgcagtgctccggtt
cccgaagatcttcgggcaagtcatttgcaagacgcagtggccctatacacttgttatctg
tcggagttggcttcttga
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