Rhodamnia argentea (silver malletwood): 115752879
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Entry
115752879 CDS
T10595
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rarg03036
]
115752879
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
115752879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
PHD
INTS1_R4
PHD_2
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
115752879
NCBI-ProteinID:
XP_030547139
UniProt:
A0A8B8QIW9
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All DBs
Position
8:complement(13442877..13457534)
Genome browser
AA seq
1803 aa
AA seq
DB search
MSNPVGSSSGPGWSYRGIGLSNTVHSDVASCLPLPSLPVFFGASDQELRLFDQHSTAGSF
PRRILNRPDILSQSSKIADLLRDTDVSYLKLREDFTVIPHRYVEPLELYEEVLYRNSEAF
ECFSPGHTKEHIFQSTVHVEKPLQLKVTLASQGQKELPPYRNNQLDNVLANEVSTSSRKP
KVKKKVRDEIPRDVGLSPVESQDDMVGRFSDMLEDICSKAEISGDDRDEAEWISLPIADL
RILVNEIMSVRAKKLLHLVPVDTLVKLLRVLDHQIHRAEGLSIDQCDHSDPDAISSLLCA
LESIHAALAVMAHNQMPKHLYSEEIIERILDFSRRQIMDIMCIYDPSYRALHKPVEQGAP
EVDEDDEADVDIGPSKKRRVVKSVKAKKSAVNKVSAAASTVLQKLCTILGLLKDLLLIEK
LSDSCILQLVKTNFTTFLVDNIQLLQLKAIALISGIFYWYAHHRTYVIDEMLLLLWKLPF
SKRATRAYHLPDEDQRQIQMITALLIQLVHCSANIPEVLRQASDITSIMEVSHDGTYLAK
CHEAITEACCLFWSRVLQRFTSVKTQDASEIKVMMENLVMDLLTTLNLPEYPASAPILEV
FCVLLLQNAGLKSKDIAARSMAIDLLGTIAARLKHDAVIYRRDKFLLLRELVDGDNVEQS
YPKDACFVCGDGRVERSLFTCQSCRRLFHAECMGAREHEVPDHSWSCQFCICRKQLLVLQ
SFCKSHCKDTKRNRVDKNPESTNIEVVQQLLLNFLQDSSSTDDVHVFVRWFYLCLWYKDD
PKFQENFFYYLARLKSKTVVRDTGTVSSTLTRDFIKKITLAMGQKNSFSRGFDKILHMLL
ASLRENSPIIRAKALKAVSIIVETDPEVLRDKPVQLAVEGRFCDSAISVREAALELVGRH
IASHPDVGSQYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNANFSEFTSACIEIIARVSD
DESSIQDLVCKTFFEFWFEEPPSSQTHIYSDGSSVPSEVAKKTEQIVQMLRRMPNFQLLV
TVIKRNLALDFLPQSSKAAGINPVLLASVRKRCELMCKSLLEKILQVEESSTEEAEVRSL
PYVMVLHAFCVVDPTLLAPASDPSQFVVTLHPYLKSQGDNRVVAQLLESIIFIIDAVLPL
LRKLPQSVIEELEQDLKHMIVRHSFLTVVHACIKCLCSVSKVAGKGSSVVEYLIQVFFKH
LDSQCLENKQQQMGRSLFCLGLLIRYGNSLLGCSSNRNIDVGSSLSLFKRYLLMEDFVLK
IRSLQALGFVLIARPEFMLDKDVGKIIEATLSSDSDARIKMQALQNVYEFLLDAEAQMGT
EVTTNEANYTNESSQSVPVAAGAGDTNMCGGIVQLYWDRILERCLDQNEQVRQTALKIVE
VVLRQGLVHPITCVPYLIALETDPQEVNAKLAHHLLMNMNEKYPAFFESRLGDGLQMSFI
FIQIISDGSSSGGGENVPHKGPGSMKGKSDGISFAQARLGVSRIYKLIRGNRVSRNKFMS
SIVRKFDNPIWNDTVIPFLMHCTEILASLPFTTPDEPLYLIYTINRVIQVRTGAIEANLK
AFCSRSLPRDSHDGVHGSGISQGPASQHVFSNVRSLDLNGTYQELAYQPFFNHTTSVDLN
GSIPPQIANQLNSHNSNFHEAMPHFSGACDFSSISEDDMQKIQVDCLAATALQLLLKLKR
HLKIIYGLNDARCQSFSPNETLKPGEVLAKQNVPFNISGIHANLPSTSQEVMERYQEFKG
ALREDTIDYSAYTANIKPKRPASRRASRRAGGGDDDDDDDDDNWSGRVRLTNSGRRVTRS
RLR
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccggtcggttcgagttcgggtccgggttggagctaccgaggcatagggcta
tcgaacactgtgcactccgatgtggcctcgtgcttgccgttgccttcgcttcccgtgttc
ttcggcgcgtccgatcaggagctgaggctgttcgaccagcatagcaccgccggttcgttt
cctcggaggattttgaatcgccctgacattctctctcagtcgagtaaaatcgctgatctg
cttcgggacaccgatgtctcctacttaaagcttagggaggatttcacggtgataccgcat
agatatgtggaaccgttagaactttatgaagaagttctttatcgaaattccgaagccttt
gagtgcttttctccaggtcataccaaagagcatatatttcaaagtacagtacatgtcgag
aagcctcttcaacttaaggttactcttgcaagtcaaggacaaaaagaattgcctccatat
cgaaataatcagcttgataacgttcttgctaatgaagtctctacatcttctcgaaaacca
aaggttaagaaaaaagtacgggatgaaatccctagagatgttggacttagtcctgttgaa
tcccaagatgatatggttggaaggttttctgacatgctggaggacatctgtagcaaagct
gagatttctggagatgatagagatgaagcagagtggatctcattgcctattgccgatctt
aggatacttgttaatgagataatgtcagttcgtgcgaagaagctgctacatttagttcct
gtagatactcttgttaaactactaagggttctagatcatcagatccatcgagcagaaggc
ctgtccattgatcagtgtgatcattcagatccagatgcaatttcctctctcctctgtgct
ttggaatccatacatgcagctctcgcagtaatggctcataatcagatgccaaagcatctt
tatagtgaagagatcattgagaggattcttgatttctctcgacgtcaaataatggacata
atgtgtatctatgatccatcctaccgcgctttgcataaacctgttgaacaaggggctcct
gaagttgatgaagatgatgaagcagatgtagatattggtcccagcaagaaacgccgtgtt
gtaaagagtgtaaaagcaaagaaatcagcagtgaacaaggtctcagctgctgctagtacg
gtacttcagaagctgtgtactattcttggtttacttaaggatctacttttaatagagaag
ctttcggacagttgcattctacagttggtgaaaacaaactttacaacatttttggtggat
aatatccagcttctccaactgaaggccattgctttaattagtgggatattctattggtat
gcacaccatcgcacttatgtcatcgacgaaatgcttcttttgctttggaagttgcctttc
tctaagcgtgcaacacgagcctatcacctgcctgatgaagatcagaggcaaattcagatg
attactgccctgctgatacagttagttcactgtagtgctaacattcctgaagttttaagg
caggcatctgacattacttccatcatggaagtttcacatgatggtacttatctcgcaaag
tgtcatgaagcaatcacagaggcgtgttgtcttttctggtcccgtgttctgcagcgattc
actagtgtaaagactcaggatgcatctgagataaaagtaatgatggaaaatcttgtcatg
gatctgctgaccacattgaacttacctgaatatcctgcttcagctcctattctggaggtt
ttttgtgtcctactgctacagaacgctgggctgaaatccaaagatatagctgcgcgatcc
atggccattgaccttcttgggacgattgctgcccgattaaagcatgatgctgttatttac
cggagggacaagtttttgttgctacgagaattagttgatggcgataatgttgagcaaagt
tatccgaaggatgcttgctttgtctgtggtgatgggagggtagagagatcattatttacc
tgtcaaagctgtcgaagattgttccatgctgaatgcatgggtgcaagagagcatgaagtt
cctgatcatagctggagctgtcagttttgcatctgcagaaagcaacttcttgtattgcaa
tctttttgcaaatcccattgcaaggacaccaaaagaaatcgtgttgataaaaatccagaa
tctacgaatattgaagttgttcagcagcttcttcttaatttcctccaggattcgagttcc
actgacgatgtgcatgtctttgttcgttggttctatttatgcctatggtacaaggatgat
ccaaaatttcaagaaaatttcttttactatcttgctagactgaagtcaaagactgtagtg
cgtgatactggcaccgtttcgtctactttgacaagagattttatcaagaaaatcacctta
gctatgggacaaaaaaattccttttccagagggttcgataagatccttcacatgcttttg
gcaagtctaagggaaaactctcccattataagggccaaggctctaaaagcggttagtata
attgtggagaccgacccagaggtactgcgtgacaaacctgtgcagcttgctgttgaaggg
aggttttgtgattctgctatatctgtgagagaagcagcattggaacttgtcggtaggcat
atcgcttcacatcctgatgttggatcacagtactttgagaaggttgcagagagaattaaa
gacactggagttagtgtcagaaaacgagctattaaaatcatccgggacatgtgcacttca
aatgctaatttctctgaattcactagcgcttgcattgagatcattgctcgcgttagtgat
gatgagtctagtattcaggatcttgtctgcaagactttttttgaattttggtttgaggaa
ccacccagttcccagactcatatttacagtgacggtagttctgttccatcagaggttgct
aaaaagactgagcaaatagtccaaatgttaaggaggatgccaaatttccaacttcttgtc
actgttattaagcgcaatctagcacttgattttcttccacaatcatcaaaagctgccgga
atcaaccctgttttactagcatcagttcgaaagcgctgtgagttaatgtgcaaaagcttg
ctggaaaagattttgcaggtggaggaatcaagcactgaggaagcagaggttcggtcactt
ccttacgtgatggttctgcatgcattctgcgttgtggatccgacactccttgctccagca
tccgatccttcccaatttgtggtgactttgcacccgtatctcaagagtcagggtgacaat
agagtggtggcacaattgctggaaagtatcatcttcattattgatgctgttctgcctttg
cttcggaaattgcctcaaagtgttattgaagaactagagcaagatttgaagcatatgatt
gtacggcattcttttttaaccgttgtccatgcgtgcatcaagtgcctttgctctgtgagt
aaagtagctggaaaaggttctagtgttgttgagtatcttatacaggtgttctttaaacac
ttagactcacagtgcttagagaacaagcagcagcaaatgggtcgttctcttttttgtctt
ggattgctcatccgctatggcaattctttgctgggttgttcaagtaacaggaatattgat
gttggaagcagtctcagcttgttcaaacggtatctgcttatggaggattttgttttaaaa
attagatctctgcaggctctgggatttgttttaattgcgaggcctgaatttatgttggac
aaggatgttggcaaaataattgaagccacattgtcttctgattctgatgctcgtattaag
atgcaagctctccaaaatgtgtatgagtttcttcttgatgctgaagctcaaatgggaaca
gaggttacaactaatgaggcaaattacaccaatgaaagcagtcagagcgttcctgttgct
gctggtgcaggagatactaacatgtgtgggggtatagttcaactctactgggataggata
ctggagagatgtttagaccaaaatgaacaagttcgtcagactgccctcaagattgtggaa
gtagttttgcgtcaaggtcttgtgcatcccattacatgtgttccataccttatagcactt
gaaactgatccacaggaggtaaatgccaagttggctcatcatttgctgatgaacatgaat
gagaagtatcctgcttttttcgaaagtcgtttaggggatgggctgcaaatgtcctttatt
tttatacaaattattagtgatggttcatctagcggtgggggtgagaatgtccctcacaag
ggtcctggaagcatgaaagggaaatctgatggtatctcatttgctcaagcaaggcttgga
gtttcaaggatctacaaactaattcgcggaaatcgggtttccaggaacaagtttatgtcc
tcaattgtgcgcaaatttgataatccaatatggaatgatacagtcattccttttctgatg
cactgcacagagattcttgcttcattgccgtttacgacacccgatgagccgctctatttg
atttacacgataaatcgagtaatacaagttcggaccggggccattgaggcaaatttaaag
gcgttttgttcaagatcattaccaagagacagccacgatggggtacatgggagtgggatt
agtcaagggccagcttctcaacatgtcttcagtaatgtacgatcactggatttgaatggc
acataccaagagttggcttatcagccttttttcaatcatacaacatcagttgacttgaat
ggcagtatcccaccgcagatagcaaatcagctcaattcacacaattccaattttcatgag
gcgatgccccattttagtggggcctgtgatttttctagcatctctgaggatgatatgcag
aaaatccaggttgactgtctagctgctacagcattgcagcttctgttgaaactaaagagg
catctaaaaattatttatggcctcaatgatgctcggtgccagtcattttctccaaatgag
acgctaaaacccggcgaagttctcgctaagcagaatgttccatttaatattagtggaata
catgcgaacttgccttccacttcccaagaagtcatggaaagatatcaggaatttaagggt
gctttgagggaagacaccattgattactctgcttacacagcgaatatcaaaccaaagcgg
cctgcctctagaagagcttctagacgtgcgggcggtggggatgacgatgacgacgacgac
gacgacaactggtcaggcagggtccgtctaactaatagcggaaggagagttacaaggagc
aggttaaggtaa
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