Rhodamnia argentea (silver malletwood): 115752999
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Entry
115752999 CDS
T10595
Name
(RefSeq) LOW QUALITY PROTEIN: phytochrome E-like
KO
K12123
phytochrome E
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
115752999
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_3
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
115752999
NCBI-ProteinID:
XP_030547314
UniProt:
A0A8B8QJE4
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Position
9:20379817..20387284
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AA seq
1129 aa
AA seq
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MALRGDQKKDDTTAPVSSAGSDRMRQSNDRDKAIAHYNADALLMAEFEQSSVSGKSFDYT
KSVMGVPPFVPEEKITAYLSRIQRGGLTQPFGCMLAVEEPGFRVVGYSENCFELLEIRLD
SEFLGSRSEKGLIGVDARTLFTPSSGASLAKAAASREVSLLNPVWVYSRGAQKPYYAIIH
RIDVGIVIDLEPARSGDSAMSLAGAVQSQKLAVRAISRLQSLPGGDIGLLCDTVVEDVQK
LTGYDRVMVYKFHDDDHGEVISEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRIRMICD
CNADPVKVVQTEELKQPLCLVNSTLRSPHRCHTQYMANMGSVASLVMAVIVNRGDSMKLW
GLVVCHHTSPRYVPFPLRYACEFLMQAFGLQLHMELQLASQLAEKKILRTQTLLCDMLLR
DGPLGIITQSPNIMDLVKCDGAALYYGGNCWLLGVTPTEAQVKDLAEWLLTNHGDSTGLS
TDSLADADYPGAASLGESVCGMATARITSKDILFWFRSHTANEIKWGGAKHHPEDKDDGG
RMHPRSSFKAFLEVVKCRSLPWEVSEINAIHSLQLIMRDSFLDMDVRGSKALTSAGRTDT
KMHEIDELSSVACEMVRLIETATAPIFGVDSAGLINGWNAKMAELTGLPTNEAIGKSLVN
EFIHEDSRGTFKNVLCRALQGEEDKNVELKFRAFGLHLQNSVVYILANACTSRDYTNNVI
GVCFVGQDITCEKMVMDKFVRLEGDYKAIIQSLSPLIPPIFASDDNGCCSEWNAAMEKLT
GWMRHEVIGKTLPGEIFGGYCRLKGQETLTKFMILLYQGISGQDTENFPFGFFDRKRKFV
EVSLTASRRTDTDGNIIGCFCFLQIITPDAQLVSEGQGQDDAECALKLKELAYVRQEMKN
ALNGIRFTHKLLETTAISENQKQVLDTSDACERQIMTIIEDMDFGSLHDGRLELNVEEFL
LGSLFDAVISQVMIPLRERNLQLFHEIPKEMKNLSLFGDQVRLQLVLSDFLLNVVHHASS
PDGRVEIKILPGLKLIQDGSEFLRIQIRMVHAGQGLPSALIDDMFDGESRWNTSAQEGLG
LNLSRKLLNKMNGQVHYIRESKRCYFVIDLDLKTERERQTRCSNRKQAS
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgaggagaccagaagaaggacgacaccacagccccggtttcatctgctgga
agcgacaggatgaggcagagcaacgacagggacaaagcgattgctcactacaatgcagac
gctttgcttatggctgagtttgagcagtccagcgtttctggtaagtccttcgattacacc
aagtcggtcatgggcgtccctccgtttgtgcctgaggagaaaatcactgcctatttgtca
agaatccaaaggggcggcctcactcagccctttggttgtatgcttgccgtggaagaaccg
ggttttagggtcgtcggttacagcgagaattgctttgagttgctggagattaggcttgac
agtgagtttttggggtcaagatcagagaagggtctgattggcgttgatgcaagaaccctt
tttacaccttcttcgggtgcttcgctggcgaaagcggcagcttcacgggaggtttcgttg
ttgaacccagtttgggtttattctaggggcgcccagaaaccgtattatgctataattcat
cggattgacgtggggattgtgatagatttggagcctgcgaggtccggcgattctgcgatg
tctcttgccggggcagtgcagtcgcagaagctagctgttcgcgcgatttctaggttgcag
tcacttcctgggggagatattggcttgctctgtgatacagttgtggaggatgtacagaag
ttgactggatatgacagggttatggtgtataagttccatgatgatgatcatggtgaagtc
atctctgaaatcagaaggtctgatctagaaccgtaccttggattgcattatcctgctaca
gatatccctcaagctgctcgttttttgttcaagcaaaatcgcattaggatgatttgtgat
tgcaatgcagatccagtcaaggttgtccaaaccgaagaactgaagcagcctctttgcttg
gttaattccacccttcgatcgcctcacaggtgtcacacacagtacatggccaacatgggt
tccgttgcgtcgttggtgatggctgttatcgtcaacagaggtgattcgatgaaactctgg
ggtttggtagtgtgccaccatacttcccctcgatacgtccctttcccgcttcgatatgct
tgtgagttcctcatgcaagcatttgggctgcagctccatatggagcttcaattggcatca
cagttggcagaaaagaaaattctgaggacacaaactttattatgcgacatgctgcttcga
gatggcccgcttggtatcatcactcaatcacctaatataatggatcttgtcaagtgtgac
ggagctgcattatattatggtgggaattgttggttgttgggtgtgactcctactgaggca
caagtgaaggaccttgctgagtggctgcttacaaatcatggggactctacaggtctgagt
actgatagtctggccgatgctgattaccctggggcggcttctttgggcgaaagcgtttgc
ggcatggctactgcaagaataacttcaaaggatatattgttctggttcaggtcacataca
gcaaacgaaatcaaatggggtggagctaagcatcatcctgaagataaggatgatggtgga
aggatgcatccaagatcatcctttaaagcttttcttgaagtagtgaagtgtagaagtttg
ccatgggaagtctcagaaattaatgcaatccactcattgcagcttataatgagagactcg
tttctggatatggatgtcaggggttctaaggccctgacatctgcagggcgaactgatacc
aagatgcatgaaatagatgaactcagttcggtagcatgtgaaatggttagattgattgaa
actgcgacagctcctatatttggagttgattctgctggtcttattaatgggtggaacgca
aaaatggctgaattgacagggttgccgactaatgaagctattgggaagtccctggttaac
gaattcatccatgaggactcacggggaactttcaaaaatgttttatgcagagctttgcag
ggtgaggaggataaaaatgttgagttaaaattcagggcttttggtcttcatctgcagaac
tcagtcgtttatattttggcaaatgcctgcacaagtagagactacacaaataatgtcatt
ggggtatgttttgttggtcaagacatcacatgtgagaagatggtgatggataagtttgta
cgtttggaaggggattacaaagctattatacagagtcttagcccattaattcctcctata
ttcgcttcagatgataacggttgctgctctgaatggaatgccgcaatggagaagctgact
ggttggatgagacatgaggtcataggtaaaacacttcctggagagatctttggcgggtac
tgtcgactaaaaggtcaggagactctcactaaatttatgattctgttgtaccaaggaata
agtggacaagacaccgagaacttcccttttggatttttcgatcgaaagaggaaatttgtg
gaggtttccttaactgcaagccggagaactgatacagatggcaacattattggatgcttc
tgcttcttgcaaattattacacctgatgcacaactagtctcagaaggacaaggccaagat
gatgctgaatgtgctttgaaactgaaggagttggcttatgtacgtcaagaaatgaaaaat
gctttaaatggtatcaggtttacccacaaacttctggaaactacagctatttcagaaaac
cagaagcaagttctagatacaagtgatgcttgtgaaagacagatcatgacgatcatagag
gatatggattttggaagcttacatgatggcagattggagctgaacgtggaagaatttctt
ctgggaagtctttttgatgccgtcattagtcaagtaatgatcccactgagagaaaggaat
ttgcagctctttcacgaaattccaaaggaaatgaaaaatctgagcctttttggggaccaa
gttaggcttcaacttgtcctatcggacttcttgctaaatgttgtgcaccatgcctcttca
ccagatggccgggtggaaataaagattttgcctggtttgaagcttatacaggatggcagt
gaattcttgcggatacaaatcaggatggtacatgccgggcaaggtctgccttctgctctg
atcgatgatatgtttgacggggagagtcggtggaatacaagtgcacaggagggcctcggt
ctaaacctgtcgcggaaacttctcaacaaaatgaatggtcaggtccactatattagagag
agcaagagatgttactttgtcattgacctcgatcttaaaacggagagagagagacaaaca
agatgctccaaccggaagcaggcatcttga
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