KEGG   Rhodamnia argentea (silver malletwood): 115753511
Entry
115753511         CDS       T10595                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115753511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rarg03021]
    115753511
Enzymes [BR:rarg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     115753511
Transcription machinery [BR:rarg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     115753511
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 zf-SAP30
Other DBs
NCBI-GeneID: 115753511
NCBI-ProteinID: XP_030548002
UniProt: A0A8B8QLG9
LinkDB
Position
3:complement(27856315..27865016)
AA seq 1197 aa
MGESSSYRGQMGRSDVVSLNGDDMDISSDDEELVDSPNLHDLGEPFLMGFCRKASTAFFH
EYGLISHQINSFNDFIENGIQNVFDSFGDIIVEPGFDPSKKGESDWRYALVRFGKVTLDR
PQFSGEKLAECGKEYLNLLPRHARLQNMTYSSRMKVNIHFQVYTQKLARSDKFKTGKEQF
VEKEVINDDSKDVVVGRIPIMVKSNLCWMSEAEKGDCDFDLGGYFLVKGAEKTFIAQEQI
SLKKLWISDNQGWTIAYRSAWKRKRLYIKLAGNCDVEYIRGEEKVLTAYFLSTEIPIWIL
FFALGVSSDKEVVELIDFGHDDSRVVNILFASVHEADEKYNGFRRGGKALSEVDKSIKNC
KFPPAESIEECFNNYLFPSLTGRKRKARYLAYMVKCLLEAYTGRRKCDNKDDFRNKRLDL
AGELLERELRVQILNARRRMMRAIQRDLYPDRSIHDIEHYLDASIITNGLSRAFSTGAWS
HPFKAERISGVVATLRRTNPLQAVSDMRKMRQHVNYTGKVGDARYPHPSHWGKVCFLSTP
DGENCGLVKNLAATGLVSTNTLEPLDGILHDCGMEKVTDDSSTSLRGKIKIFLNGDWIGI
CEDSLSFVNSLRNKRRRKELPSQVEIKRDVHQGEVRIFSDSGRILRPLLVVNNLKRIKAL
KGDQYDFLTLLDKGIVELIGAEEEEDCCTAWSVKNLFKGDDQNRPVKYTHCELDMSYLLG
LSCGIIPFANHDHARRVLYESEKHSQQGIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMIS
DCLGKQGNSLGNKGMLPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASMERGMFRSEHI
RSHKADVENRESLEKKRRSEDSVNFAKMQSKIGRVDSLDDDGLPFVGANLQSGDIVIGRC
AESGVDHSIKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFASMHGQKGVL
GFLESQENFPFTVQGIVPDVVINPHAFPSRQTPGQLLEAALGKGIALGGPVKYATPFSTP
SVEDITNQLHRAGFSRWGSERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGP
VHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDFSQMHVCQKCKTMA
NVIQRSVPGGRKIRGPYCRICGSADDIVKVNVPYGAKLLCQELFSMGISLKFDTQLC
NT seq 3594 nt   +upstreamnt  +downstreamnt
atgggtgaatcttcttcttacaggggacaaatgggtagaagtgacgtggtgtcacttaat
ggtgacgacatggacatttctagcgatgacgaagagcttgttgactctccaaacttgcat
gatcttggagagccatttctgatgggcttttgtagaaaggcatccactgcattcttccat
gagtacggtctcatcagtcaccagatcaactccttcaacgattttatcgaaaatggaatc
cagaatgtttttgattcctttggagatattatagtggagcccggttttgatccatcaaaa
aagggtgaaagcgactggcgctatgcactcgtgaggttcggaaaggtcacacttgatcga
ccgcagttttctggtgaaaagctagccgaatgcgggaaggaatatttgaatttactgccg
aggcatgctaggctccaaaacatgacatattcatcacggatgaaagtgaacatacatttt
caggtgtacacccagaaactggcgcgcagtgacaaattcaaaactgggaaagaacaattc
gtggagaaggaggtgataaatgatgacagtaaagatgtcgtggttgggaggattcccatc
atggtgaaatccaatttatgctggatgagcgaagctgagaaaggcgattgtgactttgat
cttggaggttattttctagtcaagggtgccgaaaaaacatttattgcacaagaacagatc
agtttgaagaaactctggatttctgataatcagggttggacaatagcatacaggtcggcg
tggaagaggaaaaggctatatataaagcttgcaggaaattgtgatgttgaatatatcaga
ggggaagaaaaggttctcacagcatactttttatcgacggagattcctatatggatatta
ttttttgccctcggggtgtcttcagacaaagaagtcgtggagctaattgattttgggcat
gatgattccagggttgtgaacatcctatttgcctccgttcatgaagctgatgagaaatat
aatggtttccggagaggggggaaagcacttagcgaggtagataaaagcataaagaattgc
aaatttccaccagcagaatcaattgaagagtgctttaacaactatttgtttccgagtctg
actggccgtaaaaggaaggctagatatcttgcttatatggtgaaatgcctgttagaggca
tatactggtcgcagaaaatgtgataacaaggatgactttaggaataagaggttggacttg
gctggggagcttcttgagagagagctgagagtgcaaattttgaatgcccgaaggcgaatg
atgagggcgatccagagagatctatatccagaccgaagtattcatgacattgaacactac
ctagatgcgtccattatcacaaatggcctttctagggcattttcaactggagcctggtct
catcctttcaaagcggaaaggatatctggtgttgtagcaactctacggcgaacaaatcca
ttgcaagcagtttctgatatgagaaaaatgcgccaacatgtcaattacactgggaaagtt
ggagatgcccgatacccgcacccttcccactggggcaaagtgtgtttcctatctacgcct
gatggtgaaaattgtgggcttgtgaaaaatttagctgcgacggggcttgtgagcaccaat
acattggaacctctcgatggcatactgcatgactgtggaatggaaaaggtcacagatgac
tcttctacttcacttcgtggcaaaatcaagattttcctgaatggggattggatcggcatc
tgtgaggactctctttcatttgtcaacagcctaagaaacaagcggcgccggaaggagctg
ccttcccaggtggagatcaagagggatgtacatcagggagaagtgcggatattctcagat
tccggaagaattctccgtcctcttttagtggtcaacaatttaaagcgaatcaaagcactg
aaaggggaccagtatgatttcctgactttgttggacaaggggattgttgaacttattggg
gccgaagaggaagaagactgttgcactgcttggagtgtgaagaacctcttcaagggagat
gatcaaaaccgccctgtaaagtatacgcattgcgaacttgacatgtcatatttgttaggt
ttaagctgtggtatcattccctttgccaatcatgatcatgcaaggagagtcctctatgag
tctgagaagcattctcagcagggaatcggtttctccacgacaaatccaaatatcagggtg
gacactctgtcccaccagttgtactatcctcagaggccactattccggacaatgatatct
gattgcctcggaaaacaaggcaactctcttggtaacaaaggaatgctaccaaagccagag
ttctataatggccagaatgctattgtggcagtgaatgttcatctcggctataaccaggag
gactccttagtgatgaatcgtgcttcaatggaacggggaatgttccgatcagagcacatt
aggagtcacaaggctgacgttgagaatagagaatctcttgaaaagaagcgcagatcagag
gactcggtcaattttgcaaaaatgcaaagcaaaattggacgtgtggacagccttgatgac
gatggcctcccatttgttggtgccaacttgcagagcggcgacattgtcattggtaggtgt
gcagaatctggggtggatcacagtattaagctcaagcacacagaaaggggaatggttcag
aaagttgtgctctctgcaaatgatgatggaaagaactttgccgtggtttctcttagacag
gttcgatccccatgccttggagacaagtttgctagcatgcacgggcaaaagggtgtcctt
ggctttctcgagtcacaagagaatttccccttcaccgtgcagggcatagtcccagatgtc
gtcataaacccgcacgcttttccctcacggcaaacacccggccagcttctggaggctgct
ttaggaaaggggattgctctcggagggccagtgaaatatgctacccctttctctacaccc
tcagtggaggacattaccaaccagttgcatagggctggattttcgaggtgggggagcgaa
agagtgtacaatggtcggaccggtgaaatggtccactccttaatatttatgggcccgaca
ttttaccagcggctgatccacatggctgaggacaaggtgaagttcagaaacacaggacct
gtccacccgctcacacggcagccagttgccgatcgaaagcgtttcggcggcattaaattc
ggtgagatggagagagattgcctaattgcccacggcgcatctgctaatctacacgagcgc
ctgtttaccctcagtgatttctcccaaatgcatgtctgccaaaaatgtaagactatggcc
aacgtgattcagcgatcggtaccgggtggccggaagattagaggtccttattgccggatt
tgcgggtccgctgatgacattgtgaaggtgaatgtaccttatggtgctaagctgctgtgc
caggagcttttcagcatgggcataagtcttaagtttgatacccaactgtgttaa

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