Rhodamnia argentea (silver malletwood): 115753553
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Entry
115753553 CDS
T10595
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rarg04131
]
115753553
Membrane trafficking [BR:
rarg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
115753553
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
Beta-prop_RSE1_2nd
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
115753553
NCBI-ProteinID:
XP_030548063
UniProt:
A0A8B8QNL2
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All DBs
Position
3:complement(28304239..28314183)
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AA seq
1127 aa
AA seq
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MYMAYGWPQVIPLEHGLCPSSQRIIYFKVINGLLLVVSPSHLELWSSSQHKVRLGKYKRD
AGSLRREGENSQAVWSPDAKLIAVMTTSLYLHLFKVQFSEKRVQIGGKQPSGLHFATISL
LLSEQVPFADMNLSVSNIVSDNRHMLLGLSDGSLYGISWKGEYCGAIGLDHPIQNDSDKV
ADLPRPISNGIAAIANPGAPISQQNSIKRPAIVQLELCFPMRLLFVLYADGQLLLCSVSK
RGLKQVESIRAEKRVGSGDAVCTSVASEQQILAVGTRGGVVELYDLADSASLIRAVSLFD
WGYSVEDTGPVTCIAWTPDNSSFAVGWKYRGLTVWSVSGCRLMSTIRQIGLSSLSSPMMK
PNQDSRCEPLVCGVSFMQWDEFGYRLYAIEEGSSDRVLAFSFGKCCLNRGVSGMTYVRQV
IYGEDRLLVVQSEDTNELKILHLNLPVSYLSQNWPVQHVAASKDGMYLAVAGLHGLILYD
MRLKKWRVFGDISQEQKIQCKGLLWLGKIVVVCNYDDPSNTYELLFYPRYHLDQSSLLCR
KSLLTKPMVMDVYENYILVTYRPFDVHIFHVKLSGELTPCSTPDLQLSTVRELSIMTAKS
HPAAMRFIPDQLPREYASTDHLSSSSDGLVREPSRCLILRASGELSLLDLDDGRERELTD
SVELFWVTCGQSEETTNLIEEVSWLDYGHRGMQVWYPSPGVESFKQEDFLQLDPELEFDR
EVYPLGLLPNVGVVVGVSQRMSFPACTEFPCFEPSPQAQTILHCLLRHLLQRNKSQEALR
LAELSAEKPHFSHCLEWLLFTVFDAEISRQNINKHRNNGLKSATSFTLLEKTCDLIRNFP
EYFDVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVS
QYSALRLLQATLDESLYELAGELVRFLLRSGRDYEQASSDSDRLSPRFLGYFLFRSNYKR
QSTDYRSPSFKEQSAHVTSVKNILENHASYLMSGKELSKLVAFVKGTQFDLVEYLQREKD
GSARLESFASGLELIGQKLQMSMLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLF
DLFRHDLRLWRAYSVTLQSYPAFFEYRDLVEALEEKLAAYANSEEKY
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcgtacggatggccgcaggtgattcctctagagcacggtctgtgtccgtct
tctcagagaatcatctacttcaaagtcatcaatggcctcttgctcgtcgtctccccgtct
cacctcgagctctggagctcttctcagcataaagtgaggttggggaagtacaagagggat
gcgggttcgttgcggagggagggagagaattcgcaggccgtgtggagtcctgatgccaaa
ttgattgccgttatgacgacttcactctatttacatctatttaaggttcaattttccgag
aaaagagtacagattggagggaagcaaccttctggtctgcattttgcaactatttctctt
ctcctcagcgagcaggttccttttgcagacatgaatttatctgtgagcaatattgtaagt
gataataggcatatgctgcttggactctctgacggatccttgtatggcatttcttggaag
ggagagtattgtggggcgattggacttgatcatcccatacaaaatgatagcgataaagtt
gctgacttaccacgtcctataagtaatggaattgctgccatagcgaatccaggagctccg
atatcacaacagaattccataaaaaggcctgcaattgttcagttggagctttgctttcca
atgaggctgctctttgtgttatatgccgatggtcaactgttgttgtgttcggtgagtaag
agaggactaaagcaggttgagtctattagagctgaaaagcgtgttggatctggtgatgct
gtatgtacatcagtagcttcagagcaacaaatccttgcagttggaaccagagggggggtt
gtggagctatatgaccttgccgactctgcatcacttattcgtgctgtgtctctgtttgac
tgggggtattctgtggaagacactggtccagtcacctgtattgcttggaccccagataat
tcttcctttgctgttggatggaagtatagaggacttactgtctggtctgtttcagggtgt
cgattaatgtcgacaatacgtcagattggtttaagttctttgtcttctcctatgatgaag
ccgaatcaggatagtcggtgtgaaccgctggtctgtggtgtctcatttatgcagtgggat
gaattcggatacaggctatatgctattgaggagggttcctccgatagagttcttgccttc
tcctttgggaaatgttgcctaaatagaggtgtctccggtatgacgtatgtgcgccaagtg
atttatggcgaggatcggttgcttgtcgtgcagtctgaagacacgaatgaacttaaaatt
ctgcatcttaatcttccagtttcttatctctcccaaaattggcctgttcaacatgtggca
gctagcaaagatggaatgtacttagcagttgctggccttcatgggttaattctatatgat
atgcgacttaagaagtggagggtgtttggtgacatttctcaggaacagaagatacaatgc
aaaggtttgctatggctgggaaagattgttgttgtgtgcaactatgatgatccttctaac
acgtatgagttgcttttctacccaagatatcaccttgatcaaagttcgctactttgtcgg
aagtcactgcttaccaaacccatggttatggatgtatatgaaaattacatcctagtgact
tatcgtccatttgacgttcacatcttccatgtaaaattatccggagaattgacaccatgt
agtacaccagatttgcagctttctacagtacgagaactctccatcatgactgcaaagagc
catcctgcagcaatgcgtttcatccctgaccagcttcccagagaatatgcatcgaccgat
catctctcttcatcttcagatggtttggttcgggaaccttccagatgtttgatattgaga
gcaagcggagagctttcattacttgatttggacgatggacgtgaaagggagcttacagac
tctgttgagttattttgggtgacctgtggtcaatccgaggagacaactaatttgatagaa
gaagtatcctggttggattatggtcatcgaggaatgcaggtctggtatccgtctccaggt
gtagaatcttttaagcaggaagatttcttgcagttggatcccgagctcgaatttgatcga
gaggtgtacccacttgggctcctaccaaatgtgggggtcgtggttggtgtttctcagcga
atgtcttttccagcttgtacagaattcccatgttttgaaccttctcctcaagcgcagact
atattgcattgtctacttcgccacctccttcagaggaacaaaagtcaggaagctttgagg
cttgcagaattatcagcagagaagcctcacttttctcactgtctggagtggcttcttttt
actgtctttgatgcagaaatttccaggcaaaacataaacaagcaccggaataatggcctt
aaaagtgcgaccagtttcactcttctggagaagacctgtgatttgataagaaactttccc
gagtattttgatgtggtcgtcagtgttgctagaaaaactgatggtcgtcattgggctgat
ctgttttctgccgctggaagatcaacagagttgtttgaggaatgtttccaaagaagatgg
tacaggacagcagcttgctacatactggttatagcgaagcttgaaggtccggctgtaagt
cagtatagtgccctgcgtttattgcaggcaacacttgatgaatctttgtatgaacttgcg
ggagagctggtgaggttcttgctgagatctggaagggactatgaacaggcatcttccgat
tcagacagattatcccctcgattcttagggtattttttatttcgttctaattacaagagg
cagtcgacagactacagaagcccttcgttcaaagagcaaagtgctcatgtcacttcagtc
aagaacattctagaaaaccatgctagttatttgatgtcagggaaggaactttcaaaactt
gttgcctttgtgaaaggcacacagtttgatttggtggagtatctccaacgagagaaagat
ggctccgctcgcttggagagttttgcctcagggcttgaactaattggtcaaaagcttcag
atgagtatgctgcaaagccggttggatgcagagtttctgttggctcatatgtgctccgtc
aagttcaaggagtggatagttgttcttgctactctcttgaggcggtctgaggtcctattt
gatctttttcgacatgacttgcgcttgtggagggcttacagcgtcactctacagtcatac
cctgctttctttgagtaccgtgatcttgtggaggccttggaagagaaactcgcagcatat
gccaattctgaagaaaaatactga
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