Rhodamnia argentea (silver malletwood): 115753729
Help
Entry
115753729 CDS
T10595
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Module
rarg_M00081
Pectin degradation
Brite
Enzymes [BR:
rarg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115753729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115753729
NCBI-ProteinID:
XP_048133964
LinkDB
All DBs
Position
4:9507906..9511869
Genome browser
AA seq
400 aa
AA seq
DB search
MQWDLENATKGFAAAIYLVLFTALSTLLSHGIVAASPTYNVANYGATGSGVNDDTQAFVK
AWEDTCGDSGAQGTPTLVVPGGKKFQLSPVSFKGPCKSTSIIVQIDGTLVAPSSLSGWKG
CPDSWLVFQDVANLNVHGSGQVDGRGSLWWGRAQALFFQHCINLVLSGLHHINSPRNHIA
ISGCDGGTISNLQITAPETSTNTDGIDIANTKHLDIHDLICDTGDDRIAINGQTSYINIT
RVSCGPGHGISIGSLGAHGAHDTVEEVQVRNCNFKGSTNGARIKTWQGGSGYAKSIVFDN
ITLNAVDNPIIIDQFYSIKAAQENTASSVVVSDVTYTNFQGTSASDQAIILNCSGVGCSK
ITLENIDITSSTPGKTVTASCENAHGSATSTTPPIPCLLR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgggatttggagaatgccactaagggattcgcagctgcgatatacttggtcctc
ttcactgctttgtcaactttgctaagccatggaattgttgcagcatcgcccacttacaat
gtggcaaactatggtgcaacaggaagtggagtcaatgatgatactcaagcgtttgtgaaa
gcttgggaagatacatgtggagacagtggagcacaaggcacaccaactttggttgttcct
ggtgggaagaagtttcaactgtctcctgtctctttcaaagggccgtgcaagtctacaagc
attatcgttcagattgatggaactttggttgctcctagttcactaagcggatggaaaggc
tgcccggatagctggttggttttccaagacgtggccaatctcaatgtccacggatcggga
caagtcgacggccgtggctcactttggtggggtagagctcaggccttgttctttcagcat
tgcatcaatctagtgctaagtggactgcatcacatcaacagccctaggaaccacatcgcc
atcagcggttgtgatggtggtaccatctccaatctccaaataactgcacccgaaactagc
accaacacagatggaatcgacattgctaacaccaaacacctcgacatccacgaccttata
tgcgatacgggggatgaccgtatcgctataaatggacaaaccagttacatcaatatcacc
agagtatcatgcgggcccggccacggcatcagcatcggaagcttaggcgcacacggagcc
cacgacacggtcgaagaggtacaagtgcggaattgcaacttcaagggatctacgaatgga
gcgaggattaaaacttggcagggaggttcgggatatgccaagagcattgttttcgataac
atcacgctcaacgcggtggacaatccgatcatcatcgaccaattttatagcatcaaagca
gctcaagagaatacggcatcgagcgtagtggtgagcgacgtgacgtacaccaactttcaa
gggactagtgcttcggatcaagccatcatactcaactgttccggcgtaggttgctcgaag
atcacattggaaaacattgacatcacatcgtcgacacccggaaagacagtcaccgcctca
tgcgagaacgcccatggatcggctacatcgaccacacctcctatcccttgcttgcttagg
tag
DBGET
integrated database retrieval system
