Rhodamnia argentea (silver malletwood): 115753838
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Entry
115753838 CDS
T10595
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115753838
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115753838
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115753838
NCBI-ProteinID:
XP_030548521
UniProt:
A0A8B8QMW5
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Position
1:12727417..12729289
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AA seq
406 aa
AA seq
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MAIHPCFPLLLMHAVLALRAFSSPSPVQDPELVVQEVNESILNASRRNLGFLSCGTGNPI
DDCWRCDPDWENNRRRLADCAIGFGKHAIGGRDGKIYMVTDPGGDDPMDPKPGTLRHAVI
QDEPLWIVFARDMVIRLKEELIVNSFKTIDGRGASVHLAGGPCITMQYVTNIIIHGINIH
DCKPGGNAYVRDSPDHYGWRTVSDGDGVSVFGGSHIWVDHCSLSNCHDGLIDAIHGSTAI
TLSNNYFTHHNKVMLLGHSDTSTHDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSAAPTINSQGNRFVAPNDVFNKEVTKHEDAPQSEWKHWNWRSEGDLMMNG
AFFTPSGAGASSSYARASSLGARPSSRVGPITASAGALGCKKGKRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcatccatgctttccacttctcctaatgcacgctgttctggctcttcgtgca
ttctcttctccatccccggttcaggatcctgagctagttgtacaagaagtgaatgagagc
atcctcaacgcatcgagacggaacctcggcttcctttcctgcgggacgggcaacccgatc
gacgactgctggcgttgcgaccccgactgggagaacaaccggcggcggcttgctgactgc
gccatcgggttcggcaagcatgccatcgggggccgggacggcaagatctacatggtcacg
gacccaggcggcgacgaccccatggaccccaagcccggtacgctgaggcacgctgtgatc
caggacgagcccctgtggatcgtgttcgcccgggacatggtgataaggctaaaagaagag
ctgatcgtgaactcgttcaagaccattgacggccggggcgcgagcgtgcacctcgcgggc
gggccatgcatcaccatgcagtacgtgaccaacatcatcatccacggcatcaacatacac
gactgcaagccgggagggaacgcgtacgtgagggactcgcccgatcactacgggtggagg
accgtgtcggacggcgacggggtgtccgtgttcggagggagccacatctgggtggaccac
tgctccctctccaattgccacgacgggctgatcgacgccatccatggatccacggccatc
acactctccaacaactacttcactcaccacaacaaggtgatgctcttagggcacagcgac
acttccacccacgacaagaacatgcaagtgaccattgctttcaaccactttggggagggg
cttgtccaaaggatgcccagatgtagacatgggtatttccatgtggtgaacaatgattat
acccactgggaaatgtacgcaattggtggcagtgcggcacccacaatcaatagccagggc
aacaggttcgttgctccgaacgacgtctttaacaaggaggtgactaagcacgaggatgcg
ccgcagagcgagtggaagcactggaactggaggtccgagggggatctgatgatgaacggg
gctttcttcacgccctcgggagccggcgcgtcgtcgagctacgcgagagcctcgagcctc
ggcgcgaggccgtcgtctcgggtgggccccatcacggcgagcgcgggcgcgctcggctgc
aagaagggaaagcgttgttga
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