Rhodamnia argentea (silver malletwood): 115753861
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Entry
115753861 CDS
T10595
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rarg03021
]
115753861
Transcription machinery [BR:
rarg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
115753861
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
115753861
NCBI-ProteinID:
XP_030548549
UniProt:
A0A8B8QMZ0
LinkDB
All DBs
Position
10:11884605..11889237
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AA seq
514 aa
AA seq
DB search
MGVVTISSSASRTPLGFNAKFSTSRSASKRPLIVDFRAGKNNNAALLTHHEQTYYPVETT
KEQQTKRKNARKPSRKAVCTDEVSPCTLEVDYNDAAAKLENIYKQTPAAETCYGEDVGHG
MRRRRRRTKKTKDVDKGEESKTSKRVVRTRSKNEKRFSLDERIALKKKKEEQATFSVQRK
KEVMDEEEKIDKLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKALLQVKE
NLRNDLEREPIEGELAHATNMSVAQFRRQLEVGHAARNKLIKHNLRLVLFVMNKYFQDFA
NGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTVSSFTRVSFGLE
SVRVEIQRAKLELMFQLQRLPTEEEIIDKVGISPERYHEVMRASRPVFSLHSRHSVTQEE
LISGITDVDGVGGDNRRQPALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRTLGEIAG
NLNISREMVRKHEVKALMKLKHPTRVDYLRRYIV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactatctcaagctcggcttcccgcacaccactgggatttaatgcgaag
ttttcaactagcagatctgcatcaaaaagacccttgatcgtagatttcagagcgggtaag
aacaataatgcagctttactgacgcaccatgaacagacatactatcctgtagaaaccact
aaggagcaacagacgaaacggaaaaacgcaagaaaaccatcgagaaaggctgtttgtaca
gatgaagtttctccgtgtaccttggaagttgattataatgatgctgcggccaaactcgag
aatatatacaagcagacacctgcggcggaaacctgttatggtgaagatgttggtcatggt
atgaggagacgcaggcggaggacgaagaagactaaggatgttgataagggagaagaaagt
aaaactagtaaaagagtggtccgtacccggagtaaaaatgaaaagcgtttcagcctagat
gaaaggattgcactgaaaaagaaaaaggaagagcaagcgaccttttcagttcagaggaaa
aaagaggttatggacgaggaagagaagattgataagcttgttagggactattcatcttca
accgatttggtcagcttggactggaaaaagatgaagattcctcctgttcttccttctaca
gaacatgcctggttattcaagttgatgcaaccgatgaaggctcttcttcaagtgaaggaa
aacttacgaaatgatttggaaagggaaccaatagaaggtgaattggcccacgcgacaaat
atgagcgtagctcaatttagaagacagttggaggttggtcatgccgccagaaacaagctt
attaagcataatcttcggcttgtcctgtttgtaatgaataagtattttcaagactttgcg
aatggtccaaagtttcaagatctgtgccaagctggggtaaaaggacttatcacagcgatt
gaccgctttgaaccgaaaaggaaattccggctatctacttatagcctcttctggatcagg
catgccattatacgttcaatgactgtttccagcttcacacgtgtgtcatttggcctcgag
tcggtcagagttgagatccaaagggcgaaacttgagttgatgtttcaactacagagattg
ccaacagaggaagagataattgataaagttggtatctcacctgagaggtaccacgaagtt
atgagggcctcaaggcctgttttctctcttcattctaggcactcagtcacacaagaagag
cttatcagcggaattactgatgttgatggagttggaggagacaataggaggcaaccggct
cttctcaggcttgctcttgatgatgtgctcgactccttgaagcccaaggaaagtctagtc
gtcagacagaggtatgggctcgatggtaaaggtgaccgaacattgggagagattgctggg
aacttgaacatatccagagagatggtccggaagcatgaagtgaaggctctcatgaagctc
aagcatccgacccgagtagattatcttcgtcgttacatagtctga
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