Rhodamnia argentea (silver malletwood): 115754058
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Entry
115754058 CDS
T10595
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115754058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rarg03009
]
115754058
Ribosome biogenesis [BR:
rarg03009
]
Eukaryotic type
Pre-60S particles
GTPases
115754058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
SRPRB
Beta-prop_Nup120_160
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
115754058
NCBI-ProteinID:
XP_030548839
UniProt:
A0A8B8QNT3
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All DBs
Position
3:24940846..24972243
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AA seq
1030 aa
AA seq
DB search
MGDSDDARKVRNICILAHVDHGKTTLADHLIASCGGGLLHPKLAGKLRFMDYLDEEQRRA
ITMKSSSIALNYKDYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVL
RQAWIEKLTPCLVLNKIDRLICELKLSPVEAYNRLLRIVHEVNGIVSAYKSEKYLSDVDS
MLAGSMGGEVDDENLQLIEDDEEDTFQPQKGNVAFVCALDGWGFTINEFAEFYASKLGAS
AAALQKALWGPRYYNHKTKMIVSKKALGGGSNKAKPMFVQFVLEPVWKVYQAALEPNGEK
EMLEKLIKSFNLSIPPRELQNKDPKVMLQAIMSRWLPLSDAILSMVVRCMPDPIAAQSFR
ISRLLPKREVLDSGVDSDVLAEAEIVRRSVENCNGSPNAPCVAFVSKMFAIPVKMLPQRG
PQGEVLNSSNDEGPGGESDECFLAFARIFSGEFSSGQRVFVLSALYDPLKGESMQKHVQV
AHLHSLYLMMGQGLKPVSSAKAGNIVAIRGLGQHILKSATLSSTLNCWPFSSMAFQVAPT
LRVAIEPSDPADMGALMRGLRLLNRADPFVEVSVSVRGEHVLSAAGEVHLERCIKDLKER
FAKVRLEVSPPLVSYKETIEGDLSNPLENLKLLSKGSDYVEKTTPNGRCNISVQVMKLPP
ALTKVLDESADLLGDVIGGKQGPSSKIVETQQSGTKEEENPTEALKKRIIDAIDSEISSA
AENDKDRADKCRAKWLKFLRRIWSLGPRHVGPNILFTPDSKKMISDEAVLIRGSAYVSER
LGFLDTADCDDIAAQQFVESNQGLYDEAKSLESGIISGFQLATSSGPLCDEPMWGLAFVV
EAYISPLAGKSDEPENNQQPEQHGIFTGQVMAAVKDACRAAVLRNKPRLVEAMYFCELNT
PTEHLGSLYAVLGRRRAHVLKEEMQEGSSLFTVHAYVPVAESFGFADELRRWTGGAASAL
LVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHA
TKQRTLARKV
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattctgatgatgccaggaaggttcggaatatatgcatactcgctcatgtcgat
cacggcaagaccaccctcgccgaccatttgattgcgtcctgtggcggcggattgctccac
ccgaaactcgcaggtaagcttcggtttatggattatttagacgaggaacagaggcgagct
attacgatgaagagctcttcgattgctctcaactacaaggactattcgattaatctcata
gactcccctggccacatggacttctgtagcgaagtgtcgaccgccgcacgattgagcgat
ggggcgttagtgttggttgatgcagtagagggcgtccatattcaaacccatgccgtgttg
cgccaagcttggattgaaaagctcactccatgcttggtgctcaacaaaattgataggttg
atttgtgagctgaagttgagccccgtggaggcttataacaggttgttgaggatagtccac
gaggttaacgggatcgtgagcgcttataagtcagagaagtacttgtcagacgtggactcg
atgctcgcaggttctatgggcggtgaggtcgatgacgagaatctgcagttgatcgaagat
gatgaggaggatacctttcaaccccagaaagggaatgtggcatttgtgtgtgcattagac
gggtggggatttactattaacgagtttgctgagttttatgcttcaaagctcggagccagt
gcagctgcgctgcagaaagcactttggggtccgaggtactacaaccacaaaacgaagatg
atagtcagtaagaaggctctaggtggtggaagcaataaggctaaacccatgtttgtccag
tttgtgctggagccagtttggaaggtttaccaggcagcactagaacctaatggggagaaa
gagatgcttgagaagctcatcaaatcgtttaatttatccataccacctcgggagctccag
aataaggatccgaaagtaatgctgcaagctataatgagtcgctggcttcctctttctgat
gcaattttatccatggttgttaggtgtatgccggatccaattgctgcgcaatcatttcgc
atctcacgattgcttccaaagagagaagttttagatagtggagttgactcagacgtgctt
gcagaggcagagattgttagaaggtctgttgagaattgtaatggtagtcccaacgcacca
tgtgttgcttttgtatccaagatgtttgctatcccggtgaaaatgcttcctcaaagaggt
ccacaaggggaggtgttgaacagttcaaatgatgaaggtccaggtggagaatcagatgag
tgctttcttgcgtttgctaggatttttagcggggagttttcttcggggcagagagttttt
gtgctttcggctttgtatgatcccctcaagggagaatcgatgcaaaagcatgtgcaggta
gctcacttgcattccttgtacttgatgatgggtcaaggcttaaaacccgtttcttctgca
aaggctgggaatattgtagccatccgtggccttggtcagcatatattgaaaagtgcgact
ctttcatcaactctgaactgttggcctttctcaagcatggctttccaagttgctccaacc
ctccgggtggcaattgagccgtcagacccagcggatatgggtgcccttatgagaggattg
aggcttctgaaccgagcagacccatttgtggaagtcagtgtttctgttagaggtgaacat
gtgctttctgctgcaggagaggttcatctagagaggtgcataaaggatttgaaggagagg
ttcgctaaggtaagattagaagtctcaccacccctcgtttcctataaagagactattgag
ggtgatctatccaatccattagaaaacctgaagttgctatctaagggctcagattatgtt
gagaagactacgccaaatggacggtgtaatatctcagtgcaagtcatgaaactgccacct
gcactaactaaggtgcttgacgagagtgctgacctccttggggatgttataggtggtaag
caagggccaagcagtaaaatagtggaaacacagcaatcaggaacgaaggaagaggagaat
ccaactgaagcacttaagaaacgtataatagatgctatagatagtgagatcagctcagcg
gccgagaatgacaaggatcgcgctgataaatgtagagcaaagtggctcaagttccttagg
aggatttggtcacttgggcctaggcatgttggtccaaatatactcttcactccggactcc
aagaaaatgatttctgacgaagctgttctcattcgagggtcggcctatgtatctgagaga
ttaggctttctggatactgctgattgtgatgatatagctgcacagcaatttgtagaatcg
aatcaaggattgtacgatgaagcgaagagtcttgagagtggcatcatatctggctttcaa
ctggctacatcctctggccccttgtgtgatgaaccaatgtggggcttagcttttgttgtt
gaggcctatatttctcctttggcgggaaaatctgatgaacctgaaaataatcaacagcct
gagcagcatggcatcttcactgggcaagttatggcggcagtcaaagatgcctgtagagca
gcagttctccggaataaaccccgacttgtggaagccatgtatttctgcgagttaaacact
ccgactgaacacttgggatcactgtatgctgttttgggtaggagaagggctcatgttctg
aaggaggaaatgcaggaagggtcatcgttattcacggtccacgcatatgttccggttgct
gaaagctttggtttcgcagatgagctaaggagatggacaggtggagccgccagtgctctg
cttgtacttagtcactgggaagcgcttcctgaggatcctttctttgtgcccaaaactgaa
gaggaaattgaggagtttggagatggctctagcgtacttccgaatacagcgagaaagctg
atcgatgccgtgaggcggcggaagggccttcctgtggaggaaaaggttgttcagcatgca
acgaagcagaggaccctggctcgaaaagtgtag
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