Rhodamnia argentea (silver malletwood): 115754170
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Entry
115754170 CDS
T10595
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115754170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115754170
03110 Chaperones and folding catalysts [BR:
rarg03110
]
115754170
03029 Mitochondrial biogenesis [BR:
rarg03029
]
115754170
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rarg04147
]
115754170
Enzymes [BR:
rarg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115754170
Messenger RNA biogenesis [BR:
rarg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115754170
Chaperones and folding catalysts [BR:
rarg03110
]
Heat shock proteins
HSP60 / Chaperonin
115754170
Mitochondrial biogenesis [BR:
rarg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115754170
Exosome [BR:
rarg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115754170
Exosomal proteins of other body fluids (saliva and urine)
115754170
Exosomal proteins of breast cancer cells
115754170
Exosomal proteins of colorectal cancer cells
115754170
Exosomal proteins of bladder cancer cells
115754170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
115754170
NCBI-ProteinID:
XP_030548994
UniProt:
A0A8B8QP85
LinkDB
All DBs
Position
5:6659138..6664028
Genome browser
AA seq
599 aa
AA seq
DB search
MVPPPRDSWFGLSTLEISFNTPRNRENPFPFLLLFSPCLSPQCVISFEVLSFIPLFWVQA
GVNLVAELVGLTLGPRGRNVILQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAG
ARTNELAGDGSTTSVVLAHGLISEGVKVVAAGVNPVQVSRGIVKTAKALVTELKKMSREV
EDDELVHVAAVSAGNDHVVGSMIADALRQVGRRGVVTIEKGKCRQSSLQIVEGMQFDRGY
LSSYFVNDRKKMTVEFHNCKLLLVDKKITNPKDMFKIMDSAVKEKYPILVVAEGIEQEAL
APLIRNKLRGVLKVAAIKAPAFGERKSHCLDDIAILTGGTVIRDDVGLTLEKATKEVLGT
AAKVVITKNSTLIVTDGSTRKAVEERVSQIRGLVKNTDENFQQKILYERIARLSGGIAIL
QVGAQTQVELKDKQLRVEDALNATKAAIEEGVVVGGGCSLLRLSTKVDCIKEYLDNEEQK
IGAEIFKKALSYPARQIAKNAGVNGSVVVEKVLSSNIMNYGYNAARYCYEDLLAAGIMDP
TKVVRCSLEHAASVATTFLSSDAVVVDIKEVELPVRMPMPIRKPLRKPGIPQAGMPLIV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggttccgccaccaagagactcctggttcggactctcaactcttgaaatttcattcaac
acaccccgaaatcgagaaaacccatttccttttctcctcctcttttcgccttgtctgagc
ccacaatgcgtgattagctttgaagttctttcttttattcccctcttttgggtgcaggct
ggcgtcaacttggtggcagagctggtggggttgacattgggaccgagaggacggaatgtg
atcttgcagaacaagtatgggcctcccaagattgtcaatgatggcgagactgttctcaaa
gagatagagttggaggatcctctggagaatgtcggggtgaaattggtgaggcaagctggc
gcaagaacaaatgaacttgctggtgatgggtccactacctccgtggttcttgctcatggc
ctgatctccgagggtgtgaaggttgttgcagctggcgttaatcctgttcaagtttctcgt
gggattgtaaagactgcaaaggcccttgtcacagagctgaagaagatgtccagagaggtc
gaggacgatgaactcgtacatgttgctgcagttagcgcggggaatgatcatgtggtggga
agcatgatagctgacgcacttcggcaagtgggtcggagaggcgttgtcacaatagagaag
gggaagtgtcgccaaagcagcctacaaatcgttgaaggcatgcaatttgaccgtggatat
ctgtcttcttactttgtgaacgacagaaagaagatgacagtggaatttcacaattgcaag
ttacttttggttgacaagaaaatcacaaacccgaaggacatgtttaagattatggatagt
gctgttaaagagaagtatccaatcctcgtagtcgcggaaggtattgagcaggaagctctg
gctcctctaataaggaacaagctcagaggcgtgctgaaggtagcagctattaaggctcct
gcatttggtgaacgcaagagccattgcttagatgatattgccatattaacaggaggcact
gtcatcagagacgatgtggggttgactctggaaaaagccacaaaggaagtactgggaaca
gctgcgaaggttgtgataaccaaaaattcaacattgatagttacagatggaagcacaaga
aaggctgttgaggagagagtttctcaaatccgaggccttgtcaagaacactgatgaaaat
tttcaacagaagatactgtatgaaagaatagcaaggttatcgggaggaattgctattctt
caagtgggagctcaaacgcaagtggagttgaaggataaacagctgagagttgaagatgcc
ttgaatgcaacgaaggcagcaattgaggaaggtgttgtagttggtggtggctgtagtctt
ttgagactgtctacaaaggttgattgcatcaaagaatatctagataatgaagagcagaag
ataggagcagagattttcaagaaagctctaagctaccctgcaaggcagatagccaagaat
gctggtgtcaatggaagtgtggtagtggagaaggtcctatcgagtaacatcatgaactac
ggatataatgctgcaaggtactgctatgaggatttactggcagctggaataatggatccg
acgaaggtggtaagatgttctttggagcacgcggcatctgtggcaacaacttttctaagc
tccgatgcagttgtcgtcgacattaaggaagtagagctgcctgtacggatgccgatgccg
ataagaaagcctcttagaaagccaggtattccccaagcaggcatgccacttattgtgtag
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