Rhodamnia argentea (silver malletwood): 115754399
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Entry
115754399 CDS
T10595
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03082
ATP-dependent chromatin remodeling
rarg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115754399
03083 Polycomb repressive complex
115754399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rarg03036
]
115754399
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115754399
Histone modification proteins
HAT complexes
HATB complex
115754399
HDAC complexes
Sin3A-HDAC complex
115754399
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115754399
PRC2.2
115754399
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115754399
Heterochromatin formation proteins
Other heterochromatin formation proteins
115754399
Chromatin remodeling factors
NuRD complex
115754399
NuRF complex
115754399
NuRF complex (fruit fly)
115754399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD_LRWD1
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115754399
NCBI-ProteinID:
XP_030549264
UniProt:
A0A8B8QPZ6
LinkDB
All DBs
Position
9:17547330..17552202
Genome browser
AA seq
424 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKLILGTHTSENEPNYLMLAQVQLPLEDAENDARHYEDDRADVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKALDAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDAHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVSSVAEDNILQIWQMAENIYHDEDDIPGEES
NKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacgaggaggaaatgcggggggagatcgaggagcggctgatcaacgaggag
tacaagatatggaagaagaatacgcctttcctctacgacctcgtcatcacccacgccctc
gagtggccctccctcaccgtggagtggctgcccgaccgggaggagccccccggcaaggac
tactccgtccagaagctcatcctcgggacccacacctccgagaacgagcccaactacctg
atgctcgcccaggtccagctgccgctcgaggacgccgagaacgacgcccggcactacgag
gacgaccgcgcggacgtcggcgggtttggttgcgcgaacggcaaggttcaaattatacag
caaattaatcatgacggagaggtgaaccgagcccgttacatgccacaaaactcctttatc
atagcaaccaagacagttagtgcagaagtttatgtttttgattacagcaagcacccttct
aagcctccactagatggtgcatgcagtcctgacttaaggttgaggggccacagtactgaa
ggctatggattatcttggagtaagttcaagcaaggacatctactcagtggttcagacgat
gctcagatatgcttatgggacatcaatgcaactcctaaaaacaaggctctcgatgccatg
caaatcttcaaggttcatgagggtgttgttgaagatgtagcatggcacctcagacatgaa
tatttatttggttcagttggagatgatcaatacctgctaatatgggatctacggactcca
tcagttagcaagcctgtccaatctgtagttgctcatcagagtgaggttaactgtttagca
ttcaacccctttaatgaatgggttgttgcaacgggttctacagataagactgttaagtta
tttgatctacgcaagatcagcactgcacttcacaccttcgatgctcacaaggaagaagtt
ttccaagttgggtggaatccgaagaatgagacaatcttagcttcatgctgccttggtaga
cgccttatggtgtgggatcttagcaggatcgatgaagagcagacgccggaggatgctgaa
gatgggccacccgagttgctcttcattcatggtggccatacaagtaaaatttcagacttt
tcatggaacccgtgtgaagactgggtcgtatccagcgtggctgaggacaacatccttcaa
atatggcagatggctgagaatatctaccatgatgaggatgatattccaggagaagagtct
aataaaggatcctga
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